RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SELENOSQ9BQE4 189 aa17.6■□□□□ 0.41
TM9SF1-201ENST00000261789 OSBPL7Q9BZF2 842 aa17.6■□□□□ 0.41
TM9SF1-201ENST00000261789 FEM1BQ9UK73 627 aa17.6■□□□□ 0.41
TM9SF1-201ENST00000261789 CCDC169A6NNP5 214 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 MIF4GDA9UHW6 222 aaKnown RBP17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 SPOPO43791 374 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 CTNNA2P26232 953 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 HADHBP55084 474 aaKnown RBP17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 MTMR1Q13613 665 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 MYBPC2Q14324 1141 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 YTHDF3Q7Z739 585 aaKnown RBP17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 FAM160B2Q86V87 743 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 CCDC13Q8IYE1 715 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 CCDC105Q8IYK2 499 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 ZNF564Q8TBZ8 553 aaPredicted RBP17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 CABS1Q96KC9 395 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 ZNF341Q9BYN7 854 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 RAVER2Q9HCJ3 691 aaKnown RBP17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 PCDHA3Q9Y5H8 950 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 ASTN2O75129 1339 aaPredicted RBP17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 RARAP10276 462 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 MYCLP12524 364 aaPredicted RBP17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 CHN1P15882 459 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 CHRNA3P32297 505 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 PTGER2P43116 358 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 GTF2A1P52655 376 aaPredicted RBP17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 GTF2BQ00403 316 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 SNRNP35Q16560 246 aaKnown RBP17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 SEL1L2Q5TEA6 688 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 CPLX4Q7Z7G2 160 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 CCDC25Q86WR0 208 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 EPS8L3Q8TE67 593 aaKnown RBP17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 CD101Q93033 1021 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 ZNF653Q96CK0 615 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 RASAL2Q9UJF2 1139 aa17.59■□□□□ 0.41
TM9SF1-201ENST00000261789 CTNND1O60716 968 aaKnown RBP17.58■□□□□ 0.41
TM9SF1-201ENST00000261789 ICAM1P05362 532 aa17.58■□□□□ 0.41
TM9SF1-201ENST00000261789 EIF3BP55884 814 aaKnown RBP17.58■□□□□ 0.41
TM9SF1-201ENST00000261789 PPP2R5EQ16537 467 aa17.58■□□□□ 0.41
TM9SF1-201ENST00000261789 RSBN1LQ6PCB5 846 aaPredicted RBP17.58■□□□□ 0.41
TM9SF1-201ENST00000261789 TAAR1Q96RJ0 339 aa17.58■□□□□ 0.41
TM9SF1-201ENST00000261789 PFASO15067 1338 aa17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 DNM1LO00429 736 aa17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 NUDT17P0C025 328 aa17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 CYP11B1P15538 503 aa17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 ACTN3Q08043 901 aaPredicted RBP17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 C2CD6Q53TS8 623 aa17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 TAS1R2Q8TE23 839 aa17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 PI4K2AQ9BTU6 479 aa17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 TRIM7Q9C029 511 aa17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 MTFR1LQ9H019 292 aa17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 ADAM7Q9H2U9 754 aa17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 PCYOX1Q9UHG3 505 aa17.58■□□□□ 0.4
TM9SF1-201ENST00000261789 SRRM3A6NNA2 597 aaPredicted RBP17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 CLDN3O15551 220 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 PAEPP09466 180 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 DLATP10515 647 aaKnown RBP17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 SNX1Q13596 522 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 TNIP1Q15025 636 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 CCDC38Q502W7 563 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 XKR9Q5GH70 373 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 CCDC121Q6ZUS5 278 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 HOOK3Q86VS8 718 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 SLC13A5Q86YT5 568 aaPredicted RBP17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 C1orf54Q8WWF1 131 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 TATDN2Q93075 761 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 CNKSR1Q969H4 720 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 XPO6Q96QU8 1125 aaKnown RBP17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 RPS6KC1Q96S38 1066 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 DBR1Q9UK59 544 aaKnown RBP17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 P4HA2O15460 535 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 DRD4P21917 467 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 COILP38432 576 aaPredicted RBP17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 MNAT1P51948 309 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 DRG2P55039 364 aaKnown RBP17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 SIX1Q15475 284 aaPredicted RBP17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 ERMARDQ5T6L9 678 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 DAB2IPQ5VWQ8 1189 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 LLGL2Q6P1M3 1020 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 OGFOD1Q8N543 542 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 FLAD1Q8NFF5 587 aa17.57■□□□□ 0.4
TM9SF1-201ENST00000261789 COL2A1P02458 1487 aaPredicted RBP17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 GOLGA6L7A0A1B0GV03 622 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 RGS16O15492 202 aaPredicted RBP17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 CCNE2O96020 404 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 CNGA1P29973 690 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 SPDYE2Q495Y8 402 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 C12orf56Q8IXR9 622 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 CACNA2D3Q8IZS8 1091 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 HELQQ8TDG4 1101 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 SHC3Q92529 594 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 CCDC113Q9H0I3 377 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 WNT8AQ9H1J5 351 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 USP20Q9Y2K6 914 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 UBIAD1Q9Y5Z9 338 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 RPS6P62753 249 aaKnown RBP17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 SUGP1Q8IWZ8 645 aaKnown RBP17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 PLCD3Q8N3E9 789 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 SYTL5Q8TDW5 730 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms