RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 BIN2Q9UBW5 565 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-201ENST00000261443 MTUS1Q9ULD2 1270 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 NAALADL1Q9UQQ1 740 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 ALG6Q9Y672 507 aa7.73□□□□□ -1.17
CSDE1-201ENST00000261443 KAT6BQ8WYB5 2073 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 FAM47DPA6NHR8 397 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 PFDN1O60925 122 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 PSMG1O95456 288 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 CYP2D6P10635 497 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 WDR4P57081 412 aaKnown RBP7.72□□□□□ -1.17
CSDE1-201ENST00000261443 TFAP4Q01664 338 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 CACNB1Q02641 598 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-201ENST00000261443 LSAMPQ13449 338 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 EDRF1Q3B7T1 1238 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 ACSBG2Q5FVE4 666 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 FRMD5Q7Z6J6 570 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 ZDHHC14Q8IZN3 488 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 C7orf43Q8WVR3 580 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 KRT35Q92764 455 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 MIPEPQ99797 713 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 CADM1Q9BY67 442 aaKnown RBP7.72□□□□□ -1.17
CSDE1-201ENST00000261443 SYNCQ9H7C4 482 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 TMEM165Q9HC07 324 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 AAASQ9NRG9 546 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 GCNT4Q9P109 453 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 LNPEPQ9UIQ6 1025 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 COMMD3-BMI1R4GMX3 469 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 MIF4GDA9UHW6 222 aaKnown RBP7.72□□□□□ -1.17
CSDE1-201ENST00000261443 RASA4BC9J798 803 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 MAGEB2O15479 319 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 RASA4O43374 803 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 HNRNPCL1O60812 293 aaKnown RBP7.72□□□□□ -1.17
CSDE1-201ENST00000261443 CCDC22O60826 627 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 CDH16O75309 829 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 ECEL1O95672 775 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 GGPS1O95749 300 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 GOLGA8HP0CJ92 632 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 ETS2P15036 469 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 DESP17661 470 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 CHKAP35790 457 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 EPHA7Q15375 998 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 TMEM119Q4V9L6 283 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 LIN52Q52LA3 116 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 PPP4R3CPQ6ZMV5 832 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 MIGA2Q7L4E1 593 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 CCDC125Q86Z20 511 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 MCUR1Q96AQ8 359 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 HIC2Q96JB3 615 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 POP1Q99575 1024 aaKnown RBP7.72□□□□□ -1.17
CSDE1-201ENST00000261443 SIX2Q9NPC8 291 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-201ENST00000261443 A0A1B0GUL6 1792 aa7.72□□□□□ -1.17
CSDE1-201ENST00000261443 NPHP3-ACAD11A0A0J9YXS1 232 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 TCRBV7S2A1N4TA0A589 114 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 ERVV-2B6SEH9 535 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 SLC37A4O43826 429 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 ATP6V1G1O75348 118 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 SPAG7O75391 227 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 MARCKSL1P49006 195 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 SH3BGRP55822 239 aaPredicted RBP7.71□□□□□ -1.17
CSDE1-201ENST00000261443 RTP1P59025 263 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 USP46P62068 366 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 ORC2Q13416 577 aaPredicted RBP7.71□□□□□ -1.17
CSDE1-201ENST00000261443 ECM1Q16610 540 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 WDR72Q3MJ13 1102 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 MTDHQ86UE4 582 aaKnown RBP7.71□□□□□ -1.17
CSDE1-201ENST00000261443 DGKHQ86XP1 1220 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 C10orf82Q8WW14 230 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 RBM17Q96I25 401 aaKnown RBP7.71□□□□□ -1.17
CSDE1-201ENST00000261443 HAPLN3Q96S86 360 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 BTBD10Q9BSF8 475 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 CPVLQ9H3G5 476 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 SAR1AQ9NR31 198 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 RHBDL2Q9NX52 303 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 TMEM260Q9NX78 707 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 STX18Q9P2W9 335 aaKnown RBP7.71□□□□□ -1.17
CSDE1-201ENST00000261443 ZNF212Q9UDV6 495 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 ASIC3Q9UHC3 531 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 LGALS13Q9UHV8 139 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 COG5Q9UP83 839 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 PHLPP1O60346 1717 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 PCDH11YQ9BZA8 1340 aa7.71□□□□□ -1.17
CSDE1-201ENST00000261443 GYG2O15488 501 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 EDF1O60869 148 aaKnown RBP7.71□□□□□ -1.18
CSDE1-201ENST00000261443 CETPP11597 493 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 TNFAIP3P21580 790 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 DEUP1Q05D60 604 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 SFSWAPQ12872 951 aaKnown RBP7.71□□□□□ -1.18
CSDE1-201ENST00000261443 SPARCL1Q14515 664 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 TMED2Q15363 201 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 SLC45A4Q5BKX6 768 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 SPDYAQ5MJ70 313 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 NLRP9Q7RTR0 991 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 KIAA0825Q8IV33 1275 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 KSR1Q8IVT5 923 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 ZC3H3Q8IXZ2 948 aaKnown RBP7.71□□□□□ -1.18
CSDE1-201ENST00000261443 KBTBD2Q8IY47 623 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 VPS52Q8N1B4 723 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 REXO1Q8N1G1 1221 aaKnown RBP7.71□□□□□ -1.18
CSDE1-201ENST00000261443 ZCRB1Q8TBF4 217 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms