RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CASS4Q9NQ75 786 aa12.83□□□□□ -0.35
COL8A1-201ENST00000261037 RGL1Q9NZL6 768 aa12.83□□□□□ -0.35
COL8A1-201ENST00000261037 CPSF1Q10570 1443 aaKnown RBP12.83□□□□□ -0.36
COL8A1-201ENST00000261037 TTC26A0AVF1 554 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 GRIK1P39086 918 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 TBCCQ15814 346 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 PBXIP1Q96AQ6 731 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL8A1-201ENST00000261037 ECT2Q9H8V3 914 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 NFKBIAP25963 317 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 SH3KBP1Q96B97 665 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 STAP1Q9ULZ2 295 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 PDHA1P08559 390 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 CDH6P55285 790 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 CCDC78A2IDD5 438 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 KRT17Q04695 432 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 FASTKD1Q53R41 847 aaKnown RBP12.83□□□□□ -0.36
COL8A1-201ENST00000261037 IZUMO3Q5VZ72 239 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 BTBD8Q5XKL5 378 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 ST13P4Q8IZP2 240 aaPredicted RBP12.83□□□□□ -0.36
COL8A1-201ENST00000261037 MXD3Q9BW11 206 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 COG4Q9H9E3 785 aa12.83□□□□□ -0.36
COL8A1-201ENST00000261037 SCAF8Q9UPN6 1271 aaKnown RBP12.83□□□□□ -0.36
COL8A1-201ENST00000261037 TNS3Q68CZ2 1445 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 DIP2CQ9Y2E4 1556 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 APOL1O14791 398 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 DNAJC6O75061 913 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 PODNQ7Z5L7 613 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 SRBD1Q8N5C6 995 aaKnown RBP12.82□□□□□ -0.36
COL8A1-201ENST00000261037 RNF149Q8NC42 400 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 OR6J1Q8NGC5 347 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 NRBF2Q96F24 287 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 CDHR2Q9BYE9 1310 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 BCAR1P56945 870 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 PRAMEP78395 509 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 EFTUD2Q15029 972 aaKnown RBP eCLIP12.82□□□□□ -0.36
COL8A1-201ENST00000261037 CC2D1AQ6P1N0 951 aaPredicted RBP12.82□□□□□ -0.36
COL8A1-201ENST00000261037 LDHDQ86WU2 507 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 CLEC10AQ8IUN9 316 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 OR6P1Q8NGX9 317 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 RFWD2Q8NHY2 731 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 CPA5Q8WXQ8 436 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 RMDN1Q96DB5 314 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 BPIFA3Q9BQP9 254 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 TEKT2Q9UIF3 430 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 PIN4Q9Y237 131 aaKnown RBP12.82□□□□□ -0.36
COL8A1-201ENST00000261037 HAUS5O94927 633 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 SYF2O95926 243 aaKnown RBP12.82□□□□□ -0.36
COL8A1-201ENST00000261037 HMBSP08397 361 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 HNRNPH2P55795 449 aaKnown RBP12.82□□□□□ -0.36
COL8A1-201ENST00000261037 PDXDC1Q6P996 788 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 CDKL3Q8IVW4 592 aaPredicted RBP12.82□□□□□ -0.36
COL8A1-201ENST00000261037 SLC30A5Q8TAD4 765 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 TMEM143Q96AN5 459 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 BTBD6Q96KE9 485 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 FAM84BQ96KN1 310 aaPredicted RBP12.82□□□□□ -0.36
COL8A1-201ENST00000261037 DDX56Q9NY93 547 aaKnown RBP12.82□□□□□ -0.36
COL8A1-201ENST00000261037 ZNF185O15231 689 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 MYBL1P10243 752 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 RGS7P49802 495 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 ARSEP51690 589 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 PPP2R2AP63151 447 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 TMEM62Q0P6H9 643 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 MTF1Q14872 753 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 USP33Q8TEY7 942 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 MS4A14Q96JA4 679 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 CCDC90BQ9GZT6 254 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 ZCWPW1Q9H0M4 648 aa12.82□□□□□ -0.36
COL8A1-201ENST00000261037 BCORL1Q5H9F3 1711 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 FAM205CA6NFA0 338 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 SYCE1LA8MT33 242 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 COPB2P35606 906 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
COL8A1-201ENST00000261037 MFSD14CQ5VZR4 134 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 CEP70Q8NHQ1 597 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 FAM161BQ96MY7 647 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 ACAP3Q96P50 834 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 WARS2Q9UGM6 360 aaKnown RBP12.81□□□□□ -0.36
COL8A1-201ENST00000261037 PPRC1Q5VV67 1664 aaKnown RBP12.81□□□□□ -0.36
COL8A1-201ENST00000261037 GOLGA8RI6L899 631 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 CTSHP09668 335 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 ERFP50548 548 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 AGPAT1Q99943 283 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 CENPKQ9BS16 269 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 GGT7Q9UJ14 662 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 E2F8A0AVK6 867 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 PRKCBP05771 671 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 BRAFP15056 766 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 NNMTP40261 264 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 MORF4L2Q15014 288 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 NUDCD3Q8IVD9 361 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 RHOT1Q8IXI2 618 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 WNT8AQ9H1J5 351 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 PARVAQ9NVD7 372 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 IRF1P10914 325 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 CAV1Q03135 178 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 EN1Q05925 392 aaPredicted RBP12.81□□□□□ -0.36
COL8A1-201ENST00000261037 HAUS6Q7Z4H7 955 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 SLC26A7Q8TE54 656 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 ING2Q9H160 280 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms