RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 EXT2Q93063 718 aa6.8□□□□□ -1.32
BRIP1-201ENST00000259008 STAP1Q9ULZ2 295 aa6.8□□□□□ -1.32
BRIP1-201ENST00000259008 ATRNO75882 1429 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 CNTNAP5Q8WYK1 1306 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 SALL1Q9NSC2 1324 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 ITGB3P05106 788 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 CKBP12277 381 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 INSRRP14616 1297 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 EEF1GP26641 437 aaKnown RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 NDUFV1P49821 464 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 AP1B1Q10567 949 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 NR1H3Q13133 447 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 SLC12A1Q13621 1099 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 PCNX4Q63HM2 1172 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 GMCL1Q96IK5 515 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 RNPC3Q96LT9 517 aaKnown RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 PHF20Q9BVI0 1012 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 NDST4Q9H3R1 872 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 GPRC5CQ9NQ84 441 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 DPP3Q9NY33 737 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 SLC15A5A6NIM6 579 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 FARP2O94887 1054 aaPredicted RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 AKAP5P24588 427 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 SDC4P31431 198 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 LBX1P52954 281 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 ORC1Q13415 861 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 SPRYD7Q5W111 196 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 IL31Q6EBC2 164 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 ZNF746Q6NUN9 644 aaPredicted RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 CDC26Q8NHZ8 85 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 CYP4F11Q9HBI6 524 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 SARS2Q9NP81 518 aaKnown RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 ASNSD1Q9NWL6 643 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 PDS5AQ29RF7 1337 aaKnown RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 OPA1O60313 960 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 PEX10O60683 326 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 USP2O75604 605 aaPredicted RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 GNL1P36915 607 aaPredicted RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 ARL4DP49703 201 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 CDK17Q00537 523 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 RAD51Q06609 339 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 SF3A3Q12874 501 aaKnown RBP eCLIP6.79□□□□□ -1.323e-7■□□□□ 8.9
BRIP1-201ENST00000259008 SMAD1Q15797 465 aaKnown RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 CCDC85BQ15834 202 aaPredicted RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 KRT39Q6A163 491 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 NXNQ6DKJ4 435 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 REM2Q8IYK8 340 aaPredicted RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 TMEM35BQ8NCS4 154 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 UHMK1Q8TAS1 419 aaKnown RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 ATP2A3Q93084 1043 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 HDAC11Q96DB2 347 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 RPGRIP1Q96KN7 1286 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 KLHL8Q9P2G9 620 aaPredicted RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 AFF4Q9UHB7 1163 aaKnown RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 NAGPAQ9UK23 515 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 IKBKBO14920 756 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 HGSO14964 777 aaPredicted RBP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 CPP00450 1065 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 YBX3P16989 372 aaKnown RBP eCLIP6.79□□□□□ -1.32
BRIP1-201ENST00000259008 EPHB3P54753 998 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 EFHC2Q5JST6 749 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 METTL7BQ6UX53 244 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 TICAM2Q86XR7 235 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 PALB2Q86YC2 1186 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 CFAP57Q96MR6 1250 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 SMC6Q96SB8 1091 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 PLEKHA5Q9HAU0 1116 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 SEL1LQ9UBV2 794 aa6.79□□□□□ -1.32
BRIP1-201ENST00000259008 ZBED1O96006 694 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 IVLP07476 585 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 ATP5DP30049 168 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.78□□□□□ -1.32
BRIP1-201ENST00000259008 PBXIP1Q96AQ6 731 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
BRIP1-201ENST00000259008 SLC28A3Q9HAS3 691 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 AGO4Q9HCK5 861 aaKnown RBP6.78□□□□□ -1.32
BRIP1-201ENST00000259008 SLC37A4O43826 429 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 ACADMP11310 421 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 PHBP35232 272 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 PRCPP42785 496 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 HARS2P49590 506 aaKnown RBP6.78□□□□□ -1.32
BRIP1-201ENST00000259008 TAF6P49848 677 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 ANTXR2P58335 489 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 IQCB1Q15051 598 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 TCP11X2Q5H9J9 407 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 PPM1LQ5SGD2 360 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 C11orf57Q6ZUT1 292 aaPredicted RBP6.78□□□□□ -1.32
BRIP1-201ENST00000259008 OTOP2Q7RTS6 562 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 UBA3Q8TBC4 463 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 MGARPQ8TDB4 240 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 CSGALNACT1Q8TDX6 532 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 ATRIPQ8WXE1 791 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 KAZALD1Q96I82 304 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 DHX35Q9H5Z1 703 aaKnown RBP6.78□□□□□ -1.32
BRIP1-201ENST00000259008 FIS1Q9Y3D6 152 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 IL18RAPO95256 599 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 INHAP05111 366 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 CKMP06732 381 aa6.78□□□□□ -1.32
BRIP1-201ENST00000259008 THP07101 528 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms