RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 EXOC7Q9UPT5 735 aa19.04■□□□□ 0.64
SRSF1-201ENST00000258962 EPHB6O15197 1021 aa19.03■□□□□ 0.64
SRSF1-201ENST00000258962 STX10O60499 249 aa19.03■□□□□ 0.64
SRSF1-201ENST00000258962 PARNO95453 639 aaKnown RBP19.03■□□□□ 0.64
SRSF1-201ENST00000258962 KRT9P35527 623 aa19.03■□□□□ 0.64
SRSF1-201ENST00000258962 ADAM17P78536 824 aa19.03■□□□□ 0.64
SRSF1-201ENST00000258962 CAPSQ13938 189 aa19.03■□□□□ 0.64
SRSF1-201ENST00000258962 E4F1Q66K89 784 aaPredicted RBP19.03■□□□□ 0.64
SRSF1-201ENST00000258962 TAF2Q6P1X5 1199 aa19.03■□□□□ 0.64
SRSF1-201ENST00000258962 SLC39A4Q6P5W5 647 aa19.03■□□□□ 0.64
SRSF1-201ENST00000258962 PSRC1Q6PGN9 363 aaPredicted RBP19.03■□□□□ 0.64
SRSF1-201ENST00000258962 LRRC8DQ7L1W4 858 aa19.03■□□□□ 0.64
SRSF1-201ENST00000258962 PCMTD1Q96MG8 357 aaPredicted RBP19.03■□□□□ 0.64
SRSF1-201ENST00000258962 PCIF1Q9H4Z3 704 aa19.03■□□□□ 0.64
SRSF1-201ENST00000258962 TRIP12Q14669 1992 aaPredicted RBP19.03■□□□□ 0.64
SRSF1-201ENST00000258962 USP27XA6NNY8 438 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 H0YCG3 227 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 FGBP02675 491 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 AFPP02771 609 aaKnown RBP19.02■□□□□ 0.64
SRSF1-201ENST00000258962 PFKMP08237 780 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 TRIM21P19474 475 aaKnown RBP19.02■□□□□ 0.64
SRSF1-201ENST00000258962 PPP2R5AQ15172 486 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 DCAF17Q5H9S7 520 aaPredicted RBP19.02■□□□□ 0.64
SRSF1-201ENST00000258962 C9orf50Q5SZB4 431 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.02■□□□□ 0.64
SRSF1-201ENST00000258962 ZNF365Q70YC5 407 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 DEFB128Q7Z7B8 93 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 RSPH3Q86UC2 560 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 ZSWIM2Q8NEG5 633 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 RNPC3Q96LT9 517 aaKnown RBP19.02■□□□□ 0.64
SRSF1-201ENST00000258962 DNAJC7Q99615 494 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 KCND1Q9NSA2 647 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 AGPAT5Q9NUQ2 364 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 HSPBP1Q9NZL4 362 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 KCNG1Q9UIX4 513 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 FRMD4BQ9Y2L6 1034 aa19.02■□□□□ 0.64
SRSF1-201ENST00000258962 A0A1W2PQJ5 194 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 ARHGAP6O43182 974 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 GAS2O43903 313 aaKnown RBP19.01■□□□□ 0.63
SRSF1-201ENST00000258962 EXOC3O60645 756 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 CAND2O75155 1236 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 ADSSP30520 456 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 TRIM71Q2Q1W2 868 aaKnown RBP19.01■□□□□ 0.63
SRSF1-201ENST00000258962 ZNF484Q5JVG2 852 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 TMEM240Q5SV17 173 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 ZNF618Q5T7W0 954 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 IER5Q5VY09 327 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 C16orf59Q7L2K0 433 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 LRRC71Q8N4P6 559 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 WNT8BQ93098 351 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.01■□□□□ 0.632e-21■■□□□ 11.4
SRSF1-201ENST00000258962 MTIF3Q9H2K0 278 aaKnown RBP19.01■□□□□ 0.63
SRSF1-201ENST00000258962 MMRN2Q9H8L6 949 aa19.01■□□□□ 0.63
SRSF1-201ENST00000258962 FAM207AQ9NSI2 230 aaPredicted RBP19.01■□□□□ 0.63
SRSF1-201ENST00000258962 LUC7L2Q9Y383 392 aaKnown RBP19.01■□□□□ 0.63
SRSF1-201ENST00000258962 MBLAC1A4D2B0 266 aaPredicted RBP19■□□□□ 0.63
SRSF1-201ENST00000258962 LRRIQ4A6NIV6 560 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 C22orf31O95567 290 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 ABCD1P33897 745 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 LRIT3Q3SXY7 679 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 EXOC8Q8IYI6 725 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 CCAR2Q8N163 923 aaKnown RBP19■□□□□ 0.63
SRSF1-201ENST00000258962 DEPTORQ8TB45 409 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 TCP11Q8WWU5 503 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 PRPF31Q8WWY3 499 aaKnown RBP19■□□□□ 0.63
SRSF1-201ENST00000258962 ZBTB10Q96DT7 871 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 IQCDQ96DY2 449 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 SOWAHDA6NJG2 315 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 RPLP2P05387 115 aaKnown RBP19■□□□□ 0.63
SRSF1-201ENST00000258962 ACTN1P12814 892 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 SCP2P22307 547 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 ZBED6P86452 979 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 MARCH8Q5T0T0 291 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 TCERG1LQ5VWI1 586 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 DPY19L2P1Q6NXN4 242 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 XXYLT1Q8NBI6 393 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 OR8K1Q8NGG5 319 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 CRACR2AQ9BSW2 395 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 LSM14BQ9BX40 385 aaKnown RBP19■□□□□ 0.63
SRSF1-201ENST00000258962 NAA15Q9BXJ9 866 aaKnown RBP19■□□□□ 0.63
SRSF1-201ENST00000258962 SUGCTQ9HAC7 445 aa19■□□□□ 0.63
SRSF1-201ENST00000258962 COL1A2P08123 1366 aa18.99■□□□□ 0.63
SRSF1-201ENST00000258962 NOL4O94818 638 aa18.99■□□□□ 0.63
SRSF1-201ENST00000258962 EDN1P05305 212 aa18.99■□□□□ 0.63
SRSF1-201ENST00000258962 KLRC1P26715 233 aa18.99■□□□□ 0.63
SRSF1-201ENST00000258962 BFSP1Q12934 665 aa18.99■□□□□ 0.63
SRSF1-201ENST00000258962 MTF1Q14872 753 aa18.99■□□□□ 0.63
SRSF1-201ENST00000258962 RAD9BQ6WBX8 426 aa18.99■□□□□ 0.63
SRSF1-201ENST00000258962 RUFY4Q6ZNE9 571 aa18.99■□□□□ 0.63
SRSF1-201ENST00000258962 RDH13Q8NBN7 331 aa18.99■□□□□ 0.63
SRSF1-201ENST00000258962 PSPC1Q8WXF1 523 aaKnown RBP18.99■□□□□ 0.63
SRSF1-201ENST00000258962 FAM49AQ9H0Q0 323 aaPredicted RBP18.99■□□□□ 0.63
SRSF1-201ENST00000258962 PHLPP2Q6ZVD8 1323 aa18.99■□□□□ 0.63
SRSF1-201ENST00000258962 HNRNPDLO14979 420 aaKnown RBP18.98■□□□□ 0.63
SRSF1-201ENST00000258962 MAPK13O15264 365 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 PIGRP01833 764 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 ADRB2P07550 413 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 CTSHP09668 335 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 APBA1Q02410 837 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 LAMTOR4Q0VGL1 99 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms