RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 DNM3Q9UQ16 869 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 CHKBQ9Y259 395 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 COL5A3P25940 1745 aaPredicted RBP12.31□□□□□ -0.44
TROAP-201ENST00000257909 SBF2Q86WG5 1849 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 SPATA31A1Q5TZJ5 1347 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 COL16A1Q07092 1604 aaPredicted RBP12.31□□□□□ -0.44
TROAP-201ENST00000257909 PNMA6FA0A0J9YX94 578 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 THAP12O43422 761 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 UPP2O95045 317 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 PYGMP11217 842 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 GM2AP17900 193 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 RFX1P22670 979 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 MARCKSL1P49006 195 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 TUBP50607 506 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 GPC5P78333 572 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 FAM186BQ8IYM0 893 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 SLFN12Q8IYM2 578 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 DRAXINQ8NBI3 349 aaPredicted RBP12.31□□□□□ -0.44
TROAP-201ENST00000257909 FAM136AQ96C01 138 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 AGPAT1Q99943 283 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 MKNK1Q9BUB5 465 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 TRIM4Q9C037 500 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 KIAA1683Q9H0B3 1180 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 APEX2Q9UBZ4 518 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 SCOCQ9UIL1 159 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 ZNF652Q9Y2D9 606 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 LRCH1Q9Y2L9 728 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 CDK5RAP2Q96SN8 1893 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 ARFGEF1Q9Y6D6 1849 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 FAM47DPA6NHR8 397 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 CLIC2O15247 247 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 NVLO15381 856 aaKnown RBP12.3□□□□□ -0.44
TROAP-201ENST00000257909 COMTP21964 271 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 FOXN2P32314 431 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 VHLP40337 213 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 ITPK1Q13572 414 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 SIX1Q15475 284 aaPredicted RBP12.3□□□□□ -0.44
TROAP-201ENST00000257909 NFIL3Q16649 462 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 POTEGQ6S5H5 508 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 RNF207Q6ZRF8 634 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 SYDE1Q6ZW31 735 aaPredicted RBP12.3□□□□□ -0.44
TROAP-201ENST00000257909 SRRM1Q8IYB3 904 aaKnown RBP12.3□□□□□ -0.44
TROAP-201ENST00000257909 RIBC1Q8N443 379 aaPredicted RBP12.3□□□□□ -0.44
TROAP-201ENST00000257909 ERMNQ8TAM6 284 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 CELF1Q92879 486 aaKnown RBP12.3□□□□□ -0.44
TROAP-201ENST00000257909 SLC7A6OSQ96CW6 309 aaPredicted RBP12.3□□□□□ -0.44
TROAP-201ENST00000257909 BICD1Q96G01 975 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 SNF8Q96H20 258 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 RGL1Q9NZL6 768 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 DLGAP2Q9P1A6 1054 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 SAP30BPQ9UHR5 308 aaKnown RBP12.3□□□□□ -0.44
TROAP-201ENST00000257909 COL14A1Q05707 1796 aaKnown RBP12.3□□□□□ -0.44
TROAP-201ENST00000257909 FRMPD2Q68DX3 1309 aaPredicted RBP12.3□□□□□ -0.44
TROAP-201ENST00000257909 TTC36A6NLP5 189 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 TMEM110-MUSTN1A8MSY1 372 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 ECE2O60344 883 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 MTA2O94776 668 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 GCNT3O95395 438 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 RFC4P35249 363 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 KCNJ1P48048 391 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 KRT17Q04695 432 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 ZRSR2Q15696 482 aaKnown RBP12.3□□□□□ -0.44
TROAP-201ENST00000257909 PPP1R15BQ5SWA1 713 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 RGS9BPQ6ZS82 235 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 FAM47EQ6ZV65 393 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 MAPKAPK5Q8IW41 473 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 WDR66Q8TBY9 1149 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 KIFAP3Q92845 792 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 CD101Q93033 1021 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 ZNF333Q96JL9 665 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 FAM210AQ96ND0 272 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 PLVAPQ9BX97 442 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 PHTF1Q9UMS5 762 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 NAALADL1Q9UQQ1 740 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 STK24Q9Y6E0 443 aa12.3□□□□□ -0.44
TROAP-201ENST00000257909 TP73O15350 636 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 FTLP02792 175 aaPredicted RBP12.29□□□□□ -0.44
TROAP-201ENST00000257909 LDHCP07864 332 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 SKIP12755 728 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 MARK3P27448 753 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 PTPN4P29074 926 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 EPHB2P29323 1055 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 MAN1A1P33908 653 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 NR1H3Q13133 447 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 MOGSQ13724 837 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 MESDQ14696 234 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 STAT4Q14765 748 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 KYNUQ16719 465 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 ERFEQ4G0M1 354 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 NBPF5PQ86XG9 351 aaPredicted RBP12.29□□□□□ -0.44
TROAP-201ENST00000257909 CATSPER3Q86XQ3 398 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 PALB2Q86YC2 1186 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 LRRC8CQ8TDW0 803 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 ITFG2Q969R8 447 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 VTI1AQ96AJ9 217 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 INTS2Q9H0H0 1204 aaKnown RBP12.29□□□□□ -0.44
TROAP-201ENST00000257909 DENND2DQ9H6A0 471 aaPredicted RBP12.29□□□□□ -0.44
TROAP-201ENST00000257909 TLE6Q9H808 572 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 DNAJC18Q9H819 358 aa12.29□□□□□ -0.44
TROAP-201ENST00000257909 ASIC3Q9UHC3 531 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms