RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 NCKAP1LP55160 1127 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 TMEM132AQ24JP5 1023 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 NT5DC1Q5TFE4 455 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 GLB1LQ6UWU2 654 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 SV2BQ7L1I2 683 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 DYMQ7RTS9 669 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 TAS1R3Q7RTX0 852 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 MICALL1Q8N3F8 863 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 MYCT1Q8N699 235 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 KLHL23Q8NBE8 558 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 COLGALT1Q8NBJ5 622 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 SPIRE2Q8WWL2 714 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 P2RX5Q93086 422 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 PLVAPQ9BX97 442 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 TRIM6Q9C030 488 aaPredicted RBP9.38□□□□□ -0.91
TMEM258-201ENST00000257262 ZHX3Q9H4I2 956 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 PDZD7Q9H5P4 517 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 RSAD1Q9HA92 442 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 UBN1Q9NPG3 1134 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 AAASQ9NRG9 546 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 MIOSQ9NXC5 875 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 LARSQ9P2J5 1176 aaKnown RBP9.38□□□□□ -0.91
TMEM258-201ENST00000257262 ARHGAP28Q9P2N2 729 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 KCNG1Q9UIX4 513 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 PLAGL2Q9UPG8 496 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 INPP5FQ9Y2H2 1132 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 CDH23Q9H251 3354 aa9.38□□□□□ -0.91
TMEM258-201ENST00000257262 TDRD15B5MCY1 1934 aaKnown RBP9.37□□□□□ -0.91
TMEM258-201ENST00000257262 TCHHQ07283 1943 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 ATG2AQ2TAZ0 1938 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 MYMKA6NI61 221 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 TRAK2O60296 914 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 FAM13AO94988 1023 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 ITGB1P05556 798 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 LAG3P18627 525 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 DNAJB1P25685 340 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 PBX3P40426 434 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 ZNF131P52739 623 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 KRT85P78386 507 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 NOMO2Q5JPE7 1267 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 ATF7IP2Q5U623 682 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 EEF1DP3Q658K8 133 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 KCNT2Q6UVM3 1135 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 HAUS6Q7Z4H7 955 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 ZNF280BQ86YH2 543 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 LRRC43Q8N309 656 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 TMEM161BQ8NDZ6 487 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 SPPL3Q8TCT6 385 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 LEO1Q8WVC0 666 aaPredicted RBP9.37□□□□□ -0.91
TMEM258-201ENST00000257262 DDX12PQ92771 950 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 STAMQ92783 540 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 DHX58Q96C10 678 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 SPATA32Q96LK8 384 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 ACO2Q99798 780 aaKnown RBP9.37□□□□□ -0.91
TMEM258-201ENST00000257262 C11orf84Q9BUA3 381 aaPredicted RBP9.37□□□□□ -0.91
TMEM258-201ENST00000257262 TARS2Q9BW92 718 aaKnown RBP9.37□□□□□ -0.91
TMEM258-201ENST00000257262 APOL6Q9BWW8 343 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 COL25A1Q9BXS0 654 aaPredicted RBP9.37□□□□□ -0.91
TMEM258-201ENST00000257262 MRPL9Q9BYD2 267 aaKnown RBP9.37□□□□□ -0.91
TMEM258-201ENST00000257262 NXF3Q9H4D5 531 aaKnown RBP9.37□□□□□ -0.91
TMEM258-201ENST00000257262 TBC1D13Q9NVG8 400 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 PARP2Q9UGN5 583 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 TNFSF13BQ9Y275 285 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 PCDHB12Q9Y5F1 795 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 ATP6V1DQ9Y5K8 247 aa9.37□□□□□ -0.91
TMEM258-201ENST00000257262 ARL5CA6NH57 179 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 NT5C1B-RDH14C9J2C7 533 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 TBCAO75347 108 aaKnown RBP9.36□□□□□ -0.91
TMEM258-201ENST00000257262 FGF18O76093 207 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 DDHD2O94830 711 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 POMCP01189 267 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 MAPTP10636 758 aaKnown RBP9.36□□□□□ -0.91
TMEM258-201ENST00000257262 NMT1P30419 496 aaKnown RBP9.36□□□□□ -0.91
TMEM258-201ENST00000257262 MLH1P40692 756 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 BCAR1P56945 870 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 NUCB2P80303 420 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 RNASELQ05823 741 aaKnown RBP9.36□□□□□ -0.91
TMEM258-201ENST00000257262 STRN3Q13033 797 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 CAMK1Q14012 370 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 E2F4Q16254 413 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 PTPROQ16827 1216 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 RESP18Q5W5W9 173 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 THNSL1Q8IYQ7 743 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 URGCPQ8TCY9 931 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 POF1BQ8WVV4 589 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 RSPH1Q8WYR4 309 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 DNAJC19Q96DA6 116 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 MRPL38Q96DV4 380 aaKnown RBP9.36□□□□□ -0.91
TMEM258-201ENST00000257262 ZBTB45Q96K62 511 aaPredicted RBP9.36□□□□□ -0.91
TMEM258-201ENST00000257262 ZFP42Q96MM3 310 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 ZNF558Q96NG5 402 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 FIZ1Q96SL8 496 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 GAD1Q99259 594 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 ADPGKQ9BRR6 497 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 MRPL4Q9BYD3 311 aaKnown RBP9.36□□□□□ -0.91
TMEM258-201ENST00000257262 GBP3Q9H0R5 595 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 LMAN2LQ9H0V9 348 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 NRDE2Q9H7Z3 1164 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 PARVGQ9HBI0 331 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms