RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 GRIK4Q16099 956 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 ASIC2Q16515 512 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 MTHFD1LQ6UB35 978 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 SYN2Q92777 582 aaPredicted RBP20.5■□□□□ 0.87
TRIM47-201ENST00000254816 MSTO1Q9BUK6 570 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 DNAJC12Q9UKB3 198 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 TRIP12Q14669 1992 aaPredicted RBP20.5■□□□□ 0.87
TRIM47-201ENST00000254816 A6NJR5 290 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 ZNF233A6NK53 670 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 CSDE1O75534 798 aaKnown RBP20.5■□□□□ 0.87
TRIM47-201ENST00000254816 VTNP04004 478 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 SERPING1P05155 500 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 SCP2P22307 547 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 BEX3Q00994 111 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 CAP1Q01518 475 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 SLC9C1Q4G0N8 1177 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 EPC2Q52LR7 807 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 LMBRD2Q68DH5 695 aaPredicted RBP20.5■□□□□ 0.87
TRIM47-201ENST00000254816 PHLDB3Q6NSJ2 640 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 CRELD2Q6UXH1 353 aaPredicted RBP20.5■□□□□ 0.87
TRIM47-201ENST00000254816 ZBTB33Q86T24 672 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 MINDY3Q9H8M7 445 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 AIPL1Q9NZN9 384 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 AKT3Q9Y243 479 aa20.5■□□□□ 0.87
TRIM47-201ENST00000254816 COL1A2P08123 1366 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 INO80B-WBP1J3KQ70 363 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 AKR1B10O60218 316 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 TADA3O75528 432 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 IGHA2P01877 340 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 JAM2P57087 298 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 GFPT1Q06210 699 aaPredicted RBP20.49■□□□□ 0.87
TRIM47-201ENST00000254816 TFDP1Q14186 410 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 MAPK6Q16659 721 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 MARCH8Q5T0T0 291 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 SLFN12LQ6IEE8 588 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 LINC01465Q8N7H1 131 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 MRPL4Q9BYD3 311 aaKnown RBP20.49■□□□□ 0.87
TRIM47-201ENST00000254816 INO80BQ9C086 356 aaPredicted RBP20.49■□□□□ 0.87
TRIM47-201ENST00000254816 SETD4Q9NVD3 440 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 APEX2Q9UBZ4 518 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 FBXL5Q9UKA1 691 aa20.49■□□□□ 0.87
TRIM47-201ENST00000254816 A0A0B4J269 797 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 RCCD1A6NED2 376 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 MAGEB2O15479 319 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 N4BP1O75113 896 aaKnown RBP20.48■□□□□ 0.87
TRIM47-201ENST00000254816 FCGRTP55899 365 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 LACTBP83111 547 aaPredicted RBP20.48■□□□□ 0.87
TRIM47-201ENST00000254816 NOGQ13253 232 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 ASTE1Q2TB18 679 aaPredicted RBP20.48■□□□□ 0.87
TRIM47-201ENST00000254816 DEFB115Q30KQ5 88 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 ELMO3Q96BJ8 720 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 CAPNS2Q96L46 248 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 ACO2Q99798 780 aaKnown RBP20.48■□□□□ 0.87
TRIM47-201ENST00000254816 B4GALT5O43286 388 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 IQCF3P0C7M6 154 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 MCCD1P59942 119 aaPredicted RBP20.48■□□□□ 0.87
TRIM47-201ENST00000254816 KRT83P78385 493 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 KLHL30Q0D2K2 578 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 IRF2BP2Q7Z5L9 587 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 KIAA1328Q86T90 577 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 CDR2LQ86X02 465 aaPredicted RBP20.48■□□□□ 0.87
TRIM47-201ENST00000254816 ARHGEF19Q8IW93 802 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 TRPV1Q8NER1 839 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 TMC2Q8TDI7 906 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 UBXN4Q92575 508 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 KAT2BQ92831 832 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 SEMA4DQ92854 862 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 TCHPQ9BT92 498 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 C2orf40Q9H1Z8 148 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 HAUS4Q9H6D7 363 aa20.48■□□□□ 0.87
TRIM47-201ENST00000254816 A0A087WZ62 844 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 PTENP60484 403 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 CETN1Q12798 172 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 MAPK8IP2Q13387 824 aaPredicted RBP20.47■□□□□ 0.87
TRIM47-201ENST00000254816 ARHGAP44Q17R89 818 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 ZPBP2Q6X784 338 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 FDXACB1Q9BRP7 624 aaPredicted RBP20.47■□□□□ 0.87
TRIM47-201ENST00000254816 IFT122Q9HBG6 1241 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 ZNF446Q9NWS9 450 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 OGFRQ9NZT2 677 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 MRFAP1Q9Y605 127 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 P4HA2O15460 535 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 CLDN3O15551 220 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 ASAP2O43150 1006 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 GFPT2O94808 682 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 IPO7O95373 1038 aaKnown RBP20.47■□□□□ 0.87
TRIM47-201ENST00000254816 ALDH1A1P00352 501 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 H2AFXP16104 143 aaPredicted RBP20.47■□□□□ 0.87
TRIM47-201ENST00000254816 TNFSF9P41273 254 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 FLT3LGP49771 235 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 MBTD1Q05BQ5 628 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 IRF5Q13568 498 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 DRAP1Q14919 205 aaPredicted RBP20.47■□□□□ 0.87
TRIM47-201ENST00000254816 KIAA0753Q2KHM9 967 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 KRT39Q6A163 491 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 TRIB2Q92519 343 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 ZNF516Q92618 1163 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 GPR88Q9GZN0 384 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 LACRTQ9GZZ8 138 aa20.47■□□□□ 0.87
TRIM47-201ENST00000254816 EPC1Q9H2F5 836 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms