RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 IRS1P35568 1242 aa27.56■■■□□ 2
LSM7-201ENST00000252622 KRT17Q04695 432 aa27.56■■■□□ 2
LSM7-201ENST00000252622 STRN3Q13033 797 aa27.56■■■□□ 2
LSM7-201ENST00000252622 MYCT1Q8N699 235 aa27.56■■■□□ 2
LSM7-201ENST00000252622 HLA-CQ95604 372 aa27.56■■■□□ 2
LSM7-201ENST00000252622 FAM193BQ96PV7 902 aaPredicted RBP27.56■■■□□ 2
LSM7-201ENST00000252622 GBP3Q9H0R5 595 aa27.56■■■□□ 2
LSM7-201ENST00000252622 PTPRHQ9HD43 1115 aa27.56■■■□□ 2
LSM7-201ENST00000252622 PARP2Q9UGN5 583 aa27.56■■■□□ 2
LSM7-201ENST00000252622 RCOR1Q9UKL0 485 aa27.56■■■□□ 2
LSM7-201ENST00000252622 UNC80Q8N2C7 3258 aa27.55■■■□□ 2
LSM7-201ENST00000252622 DDHD2O94830 711 aa27.55■■■□□ 2
LSM7-201ENST00000252622 SCNN1GP51170 649 aa27.55■■■□□ 2
LSM7-201ENST00000252622 COL19A1Q14993 1142 aa27.55■■■□□ 2
LSM7-201ENST00000252622 PDE12Q6L8Q7 609 aaKnown RBP27.55■■■□□ 2
LSM7-201ENST00000252622 SHC4Q6S5L8 630 aa27.55■■■□□ 2
LSM7-201ENST00000252622 GSTCDQ8NEC7 633 aa27.55■■■□□ 2
LSM7-201ENST00000252622 PPP2R3CQ969Q6 453 aa27.55■■■□□ 2
LSM7-201ENST00000252622 TMEM169Q96HH4 297 aa27.55■■■□□ 2
LSM7-201ENST00000252622 TARS2Q9BW92 718 aaKnown RBP27.55■■■□□ 2
LSM7-201ENST00000252622 SNTG2Q9NY99 539 aa27.55■■■□□ 2
LSM7-201ENST00000252622 DNAJB4Q9UDY4 337 aa27.55■■■□□ 2
LSM7-201ENST00000252622 FSCN2O14926 492 aa27.54■■■□□ 2
LSM7-201ENST00000252622 CSPG5O95196 566 aa27.54■■■□□ 2
LSM7-201ENST00000252622 PROZP22891 400 aa27.54■■■□□ 2
LSM7-201ENST00000252622 ME1P48163 572 aa27.54■■■□□ 2
LSM7-201ENST00000252622 SLC11A1P49279 550 aa27.54■■■□□ 2
LSM7-201ENST00000252622 DSC1Q08554 894 aa27.54■■■□□ 2
LSM7-201ENST00000252622 HAUS6Q7Z4H7 955 aa27.54■■■□□ 2
LSM7-201ENST00000252622 IGSF21Q96ID5 467 aa27.54■■■□□ 2
LSM7-201ENST00000252622 PANK2Q9BZ23 570 aa27.54■■■□□ 2
LSM7-201ENST00000252622 CDT1Q9H211 546 aa27.54■■■□□ 2
LSM7-201ENST00000252622 MIOSQ9NXC5 875 aa27.54■■■□□ 2
LSM7-201ENST00000252622 PCDHA7Q9UN72 937 aa27.54■■■□□ 2
LSM7-201ENST00000252622 ATP6V1DQ9Y5K8 247 aa27.54■■■□□ 2
LSM7-201ENST00000252622 MYMKA6NI61 221 aa27.53■■■□□ 2
LSM7-201ENST00000252622 NT5C1B-RDH14C9J2C7 533 aa27.53■■■□□ 2
LSM7-201ENST00000252622 NCK2O43639 380 aa27.53■■■□□ 2
LSM7-201ENST00000252622 TRAK2O60296 914 aa27.53■■■□□ 2
LSM7-201ENST00000252622 RECQL4O94761 1208 aa27.53■■■□□ 2
LSM7-201ENST00000252622 GRIK3Q13003 919 aa27.53■■■□□ 2
LSM7-201ENST00000252622 E2F4Q16254 413 aa27.53■■■□□ 2
LSM7-201ENST00000252622 ZNF568Q3ZCX4 644 aa27.53■■■□□ 2
LSM7-201ENST00000252622 ZPBP2Q6X784 338 aa27.53■■■□□ 2
LSM7-201ENST00000252622 TMEM173Q86WV6 379 aaPredicted RBP27.53■■■□□ 2
LSM7-201ENST00000252622 PDILTQ8N807 584 aa27.53■■■□□ 2
LSM7-201ENST00000252622 DDX12PQ92771 950 aa27.53■■■□□ 2
LSM7-201ENST00000252622 RPS6KC1Q96S38 1066 aa27.53■■■□□ 2
LSM7-201ENST00000252622 FIZ1Q96SL8 496 aa27.53■■■□□ 2
LSM7-201ENST00000252622 CUEDC2Q9H467 287 aa27.53■■■□□ 2
LSM7-201ENST00000252622 ZHX3Q9H4I2 956 aa27.53■■■□□ 2
LSM7-201ENST00000252622 SPTBN5Q9NRC6 3674 aaKnown RBP27.53■■■□□ 2
LSM7-201ENST00000252622 K7ENM7 598 aa27.52■■■□□ 2
LSM7-201ENST00000252622 ABLIM1O14639 778 aa27.52■■■□□ 2
LSM7-201ENST00000252622 MCF2P10911 925 aa27.52■■■□□ 2
LSM7-201ENST00000252622 ABCD1P33897 745 aa27.52■■■□□ 2
LSM7-201ENST00000252622 ERVFC1P60507 584 aa27.52■■■□□ 2
LSM7-201ENST00000252622 KRT85P78386 507 aa27.52■■■□□ 2
LSM7-201ENST00000252622 MRPS5P82675 430 aaKnown RBP27.52■■■□□ 2
LSM7-201ENST00000252622 HYAL1Q12794 435 aa27.52■■■□□ 2
LSM7-201ENST00000252622 AAK1Q2M2I8 961 aa27.52■■■□□ 2
LSM7-201ENST00000252622 MPZL3Q6UWV2 235 aa27.52■■■□□ 2
LSM7-201ENST00000252622 FAM178BQ8IXR5 827 aa27.52■■■□□ 2
LSM7-201ENST00000252622 COLGALT2Q8IYK4 626 aa27.52■■■□□ 2
LSM7-201ENST00000252622 PABPC5Q96DU9 382 aaKnown RBP27.52■■■□□ 2
LSM7-201ENST00000252622 UBE2ZQ9H832 354 aaPredicted RBP27.52■■■□□ 2
LSM7-201ENST00000252622 NGRNQ9NPE2 291 aaKnown RBP27.52■■■□□ 2
LSM7-201ENST00000252622 KLK14Q9P0G3 267 aa27.52■■■□□ 2
LSM7-201ENST00000252622 MYO7AQ13402 2215 aa27.51■■□□□ 1.99
LSM7-201ENST00000252622 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.51■■□□□ 1.99
LSM7-201ENST00000252622 TOM1L1O75674 476 aa27.51■■□□□ 1.99
LSM7-201ENST00000252622 ALDH2P05091 517 aa27.51■■□□□ 1.99
LSM7-201ENST00000252622 GRM5P41594 1212 aa27.51■■□□□ 1.99
LSM7-201ENST00000252622 DYMQ7RTS9 669 aa27.51■■□□□ 1.99
LSM7-201ENST00000252622 MICAL1Q8TDZ2 1067 aa27.51■■□□□ 1.99
LSM7-201ENST00000252622 BCL7CQ8WUZ0 217 aaPredicted RBP27.51■■□□□ 1.99
LSM7-201ENST00000252622 DNAJC19Q96DA6 116 aa27.51■■□□□ 1.99
LSM7-201ENST00000252622 TCF25Q9BQ70 676 aa27.51■■□□□ 1.99
LSM7-201ENST00000252622 ST6GALNAC4Q9H4F1 302 aa27.51■■□□□ 1.99
LSM7-201ENST00000252622 SEL1LQ9UBV2 794 aa27.51■■□□□ 1.99
LSM7-201ENST00000252622 RESP18Q5W5W9 173 aa27.5■■□□□ 1.99
LSM7-201ENST00000252622 ADGRD2Q7Z7M1 963 aa27.5■■□□□ 1.99
LSM7-201ENST00000252622 DDX53Q86TM3 631 aaKnown RBP27.5■■□□□ 1.99
LSM7-201ENST00000252622 IQUBQ8NA54 791 aa27.5■■□□□ 1.99
LSM7-201ENST00000252622 ASB2Q96Q27 587 aa27.5■■□□□ 1.99
LSM7-201ENST00000252622 TNMDQ9H2S6 317 aa27.5■■□□□ 1.99
LSM7-201ENST00000252622 ENTPD7Q9NQZ7 604 aa27.5■■□□□ 1.99
LSM7-201ENST00000252622 STK39Q9UEW8 545 aa27.5■■□□□ 1.99
LSM7-201ENST00000252622 TBX20Q9UMR3 447 aa27.5■■□□□ 1.99
LSM7-201ENST00000252622 FAN1Q9Y2M0 1017 aa27.5■■□□□ 1.99
LSM7-201ENST00000252622 PCDHGC5Q9Y5F6 944 aa27.5■■□□□ 1.99
LSM7-201ENST00000252622 NRP1O14786 923 aa27.49■■□□□ 1.99
LSM7-201ENST00000252622 PIGRP01833 764 aa27.49■■□□□ 1.99
LSM7-201ENST00000252622 GAP43P17677 238 aa27.49■■□□□ 1.99
LSM7-201ENST00000252622 GTF2BQ00403 316 aa27.49■■□□□ 1.99
LSM7-201ENST00000252622 TFF2Q03403 129 aa27.49■■□□□ 1.99
LSM7-201ENST00000252622 CTC1Q2NKJ3 1217 aa27.49■■□□□ 1.99
LSM7-201ENST00000252622 TJAP1Q5JTD0 557 aa27.49■■□□□ 1.99
LSM7-201ENST00000252622 LEO1Q8WVC0 666 aaPredicted RBP27.49■■□□□ 1.99
LSM7-201ENST00000252622 TCHPQ9BT92 498 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms