RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CAPSQ13938 189 aa25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 TLK2Q86UE8 772 aa25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 ZNF668Q96K58 619 aaPredicted RBP25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 PUF60Q9UHX1 559 aaKnown RBP25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 HOXD8P13378 290 aaPredicted RBP25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 DRAP1Q14919 205 aaPredicted RBP25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 BRDTQ58F21 947 aaPredicted RBP25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 FBXO38Q6PIJ6 1188 aa25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 KCNN1Q92952 543 aa25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 PACSIN1Q9BY11 444 aa25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 TMEM117Q9H0C3 514 aa25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 NENFQ9UMX5 172 aa25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 CASP8AP2Q9UKL3 1982 aa25.33■■□□□ 1.65
SYNGR3-201ENST00000248121 KAT6AQ92794 2004 aa25.33■■□□□ 1.64
SYNGR3-201ENST00000248121 IGKV6-21A0A0C4DH24 114 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 LRRIQ4A6NIV6 560 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 HNRNPDLO14979 420 aaKnown RBP25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 P4HA2O15460 535 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 GFPT2O94808 682 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 INSRRP14616 1297 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 SLC26A2P50443 739 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 EPC1Q9H2F5 836 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 HBP1O60381 514 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 SOX5P35711 763 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 STAT1P42224 750 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 CLCN3P51790 818 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 MTERF4Q7Z6M4 381 aaKnown RBP25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 TRIM58Q8NG06 486 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 PARD3BQ8TEW8 1205 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 POMGNT1Q8WZA1 660 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 RNF186Q9NXI6 227 aa25.32■■□□□ 1.64
SYNGR3-201ENST00000248121 ANO9A1A5B4 782 aa25.31■■□□□ 1.64
SYNGR3-201ENST00000248121 H3BRB1 525 aa25.31■■□□□ 1.64
SYNGR3-201ENST00000248121 EVI5O60447 810 aa25.31■■□□□ 1.64
SYNGR3-201ENST00000248121 N4BP1O75113 896 aaKnown RBP25.31■■□□□ 1.64
SYNGR3-201ENST00000248121 PPFIA4O75335 1185 aa25.31■■□□□ 1.64
SYNGR3-201ENST00000248121 WHAMMP3Q1A5X7 153 aa25.31■■□□□ 1.64
SYNGR3-201ENST00000248121 PRPF31Q8WWY3 499 aaKnown RBP25.31■■□□□ 1.64
SYNGR3-201ENST00000248121 MFSD14AQ96MC6 490 aa25.31■■□□□ 1.64
SYNGR3-201ENST00000248121 TUT1Q9H6E5 874 aaKnown RBP25.31■■□□□ 1.64
SYNGR3-201ENST00000248121 PMM2O15305 246 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 SRGAP2O75044 1071 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 C22orf31O95567 290 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 FERP16591 822 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 NAMPTP43490 491 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 CHMP4BP1P59074 171 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 BEX3Q00994 111 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 TEX35Q5T0J7 233 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 CEP112Q8N8E3 955 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 MAP7D2Q96T17 732 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 LRRIQ3A6PVS8 624 aaPredicted RBP25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 H0YCG3 227 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 TACC1O75410 805 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 H2AFXP16104 143 aaPredicted RBP25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 GARTP22102 1010 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 KLRC1P26715 233 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 SP3Q02447 781 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 ARHGEF19Q8IW93 802 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 CCDC127Q96BQ5 260 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 POP1Q99575 1024 aaKnown RBP25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 NAGPAQ9UK23 515 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 SAR1BQ9Y6B6 198 aa25.3■■□□□ 1.64
SYNGR3-201ENST00000248121 A6NJR5 290 aa25.29■■□□□ 1.64
SYNGR3-201ENST00000248121 MXI1P50539 228 aa25.29■■□□□ 1.64
SYNGR3-201ENST00000248121 DGKDQ16760 1214 aa25.29■■□□□ 1.64
SYNGR3-201ENST00000248121 DNAAF5Q86Y56 855 aa25.29■■□□□ 1.64
SYNGR3-201ENST00000248121 SYT11Q9BT88 431 aa25.29■■□□□ 1.64
SYNGR3-201ENST00000248121 DNAH12Q6ZR08 3092 aa25.29■■□□□ 1.64
SYNGR3-201ENST00000248121 DDX3XO00571 662 aaKnown RBP eCLIP25.28■■□□□ 1.642e-10■■■■■ 55.9
SYNGR3-201ENST00000248121 BUB1O43683 1085 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 ZSCAN20P17040 1043 aaPredicted RBP25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 CYP24A1Q07973 514 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 NAB2Q15742 525 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 KIAA0753Q2KHM9 967 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 TXLNBQ8N3L3 684 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 CD99L2Q8TCZ2 262 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 GOLGA1Q92805 767 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 BICD1Q96G01 975 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 TOPORSQ9NS56 1045 aaPredicted RBP25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 KCNG1Q9UIX4 513 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 DAAM1Q9Y4D1 1078 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 TRIP12Q14669 1992 aaPredicted RBP25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 MYADML2A6NDP7 307 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 TTLL13PA6NNM8 815 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 CYBAP13498 195 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 ANXA13P27216 316 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 EFCAB12Q6NXP0 572 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 GPD1LQ8N335 351 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 RNF10Q8N5U6 811 aaKnown RBP25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 METTL13Q8N6R0 699 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 TMC2Q8TDI7 906 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 KAT2BQ92831 832 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 SEMA4DQ92854 862 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 HAPLN2Q9GZV7 340 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 JRKLQ9Y4A0 524 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 STYXL1Q9Y6J8 313 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 THSD7BQ9C0I4 1608 aa25.28■■□□□ 1.64
SYNGR3-201ENST00000248121 MAP2K1Q02750 393 aaPredicted RBP25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 LAMTOR4Q0VGL1 99 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 ARHGAP44Q17R89 818 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms