RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ARHGEF18Q6ZSZ5 1173 aa16.82■□□□□ 0.28
SIN3B-201ENST00000248054 BZW1Q7L1Q6 419 aaKnown RBP16.82■□□□□ 0.28
SIN3B-201ENST00000248054 ZNF564Q8TBZ8 553 aaPredicted RBP16.82■□□□□ 0.28
SIN3B-201ENST00000248054 MIPOL1Q8TD10 442 aa16.82■□□□□ 0.28
SIN3B-201ENST00000248054 NUF2Q9BZD4 464 aa16.82■□□□□ 0.28
SIN3B-201ENST00000248054 ANAPC5Q9UJX4 755 aa16.82■□□□□ 0.28
SIN3B-201ENST00000248054 VPS41P49754 854 aa16.82■□□□□ 0.28
SIN3B-201ENST00000248054 CDK17Q00537 523 aa16.82■□□□□ 0.28
SIN3B-201ENST00000248054 SNRNP35Q16560 246 aaKnown RBP16.82■□□□□ 0.28
SIN3B-201ENST00000248054 MGARPQ8TDB4 240 aa16.82■□□□□ 0.28
SIN3B-201ENST00000248054 SGK1O00141 431 aa16.82■□□□□ 0.28
SIN3B-201ENST00000248054 TBC1D12O60347 775 aa16.82■□□□□ 0.28
SIN3B-201ENST00000248054 FTLP02792 175 aaPredicted RBP16.82■□□□□ 0.28
SIN3B-201ENST00000248054 SCARA5Q6ZMJ2 495 aa16.82■□□□□ 0.28
SIN3B-201ENST00000248054 HNRNPLLQ8WVV9 542 aaKnown RBP16.82■□□□□ 0.28
SIN3B-201ENST00000248054 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.82■□□□□ 0.285e-7■■□□□ 13
SIN3B-201ENST00000248054 PPME1Q9Y570 386 aa16.82■□□□□ 0.28
SIN3B-201ENST00000248054 GNA15P30679 374 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 CAV1Q03135 178 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 MFSD14CQ5VZR4 134 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 REXO1L1PQ8IX06 675 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.81■□□□□ 0.283e-6■■■■■ 42.6
SIN3B-201ENST00000248054 RILPQ96NA2 401 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 SLITRK6Q9H5Y7 841 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 INTUQ9ULD6 942 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.81■□□□□ 0.28
SIN3B-201ENST00000248054 GOLGA8QA0A0J9YX86 632 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 GOLGA8OA6NCC3 632 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 GOLGA8NF8WBI6 632 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 LPXNO60711 386 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 SMIM24O75264 130 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 CYP3A4P08684 503 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 MAPTP10636 758 aaKnown RBP16.81■□□□□ 0.28
SIN3B-201ENST00000248054 CD44P16070 742 aaKnown RBP16.81■□□□□ 0.28
SIN3B-201ENST00000248054 VCAM1P19320 739 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 GPRC5AQ8NFJ5 357 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 FMO2Q99518 471 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 SH3GL3Q99963 347 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 SLC38A10Q9HBR0 1119 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 IRAK4Q9NWZ3 460 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 SUCLA2Q9P2R7 463 aaPredicted RBP16.81■□□□□ 0.28
SIN3B-201ENST00000248054 IP6K2Q9UHH9 426 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 CIITAP33076 1130 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 GEN1Q17RS7 908 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 NBPF9Q3BBW0 867 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 SIX6OS1Q8N1H7 587 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 RNF149Q8NC42 400 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 KCTD6Q8NC69 237 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 FAM149B1Q96BN6 582 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 PNKPQ96T60 521 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.81■□□□□ 0.28
SIN3B-201ENST00000248054 DBR1Q9UK59 544 aaKnown RBP16.81■□□□□ 0.28
SIN3B-201ENST00000248054 NID2Q14112 1375 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 LRRD1A4D1F6 860 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 CYTH3O43739 400 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 PLTPP55058 493 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 MTF1Q14872 753 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 TMEM119Q4V9L6 283 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 DNAJC7Q99615 494 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 CHP1Q99653 195 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 TMEM8AQ9HCN3 771 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 UVRAGQ9P2Y5 699 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 PTPN22Q9Y2R2 807 aa16.81■□□□□ 0.28
SIN3B-201ENST00000248054 MEFVO15553 781 aaPredicted RBP16.8■□□□□ 0.28
SIN3B-201ENST00000248054 HBP1O60381 514 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 NAIF1Q69YI7 327 aaPredicted RBP16.8■□□□□ 0.28
SIN3B-201ENST00000248054 PTF1AQ7RTS3 328 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 GBP5Q96PP8 586 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 OLFML3Q9NRN5 406 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 ASNSD1Q9NWL6 643 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 FAM198AQ9UFP1 575 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 STK38LQ9Y2H1 464 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 WNT10BO00744 389 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 OATP04181 439 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 ZNF18P17022 549 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 SLC1A1P43005 524 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 NCAPHQ15003 741 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 NAB2Q15742 525 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 SPOUT1Q5T280 376 aaKnown RBP16.8■□□□□ 0.28
SIN3B-201ENST00000248054 GLYCTKQ8IVS8 523 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 CTAGE3PQ8IX95 158 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 COG1Q8WTW3 980 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 CDKL2Q92772 493 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 AGPAT5Q9NUQ2 364 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 SNX12Q9UMY4 172 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 PSMA2P25787 234 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 HOXD10P28358 340 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 IRAK1P51617 712 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 GIT2Q14161 759 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 TFDP2Q14188 446 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 HIBCHQ6NVY1 386 aaPredicted RBP16.8■□□□□ 0.28
SIN3B-201ENST00000248054 PARP9Q8IXQ6 854 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 C4orf19Q8IY42 314 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 PROCA1Q8NCQ7 364 aaPredicted RBP16.8■□□□□ 0.28
SIN3B-201ENST00000248054 DNERQ8NFT8 737 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 NUP85Q9BW27 656 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 MROH8Q9H579 483 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 FAM187AA6NFU0 413 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 DHX9Q08211 1270 aaKnown RBP16.8■□□□□ 0.28
SIN3B-201ENST00000248054 PRPSAP1Q14558 356 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms