RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 RFX8Q6ZV50 586 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 EPM2AIP1Q7L775 607 aaPredicted RBP18.07■□□□□ 0.48
SGPP1-201ENST00000247225 MIEF2Q96C03 454 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 ANAPC5Q9UJX4 755 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 ROBO1Q9Y6N7 1651 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 LRP5O75197 1615 aa18.07■□□□□ 0.48
SGPP1-201ENST00000247225 HARSP12081 509 aaKnown RBP18.06■□□□□ 0.48
SGPP1-201ENST00000247225 MAPK4P31152 587 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 JAG1P78504 1218 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 XRCC4Q13426 336 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 PLCB4Q15147 1175 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 PADI6Q6TGC4 694 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 CBWD2Q8IUF1 395 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 RMDN2Q96LZ7 410 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 NAP1L4Q99733 375 aaKnown RBP18.06■□□□□ 0.48
SGPP1-201ENST00000247225 SYNGAP1Q96PV0 1343 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 MYCLP12524 364 aaPredicted RBP18.06■□□□□ 0.48
SGPP1-201ENST00000247225 DHX34Q14147 1143 aaKnown RBP18.06■□□□□ 0.48
SGPP1-201ENST00000247225 STXBP4Q6ZWJ1 553 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 ZNF365Q70YC5 407 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 SUPT20HQ8NEM7 779 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 KIF9Q9HAQ2 790 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 O00370 1275 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 AGTP01019 485 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 IL1R1P14778 569 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 NQO1P15559 274 aaKnown RBP18.06■□□□□ 0.48
SGPP1-201ENST00000247225 ATF7P17544 494 aaPredicted RBP18.06■□□□□ 0.48
SGPP1-201ENST00000247225 CD58P19256 250 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 PTGIRP43119 386 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 NPEPPSP55786 919 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 MPP2Q14168 576 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 NAIF1Q69YI7 327 aaPredicted RBP18.06■□□□□ 0.48
SGPP1-201ENST00000247225 ARMC9Q7Z3E5 817 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 RHOT2Q8IXI1 618 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 GPR88Q9GZN0 384 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 KLHL14Q9P2G3 628 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 PAPPAQ13219 1627 aa18.06■□□□□ 0.48
SGPP1-201ENST00000247225 SPATA31A5Q5VU36 1347 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 SPATA31A7Q8IWB4 1347 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 BTNL10A8MVZ5 291 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 CES2O00748 559 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 SNX3O60493 162 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 TARSP26639 723 aaKnown RBP18.05■□□□□ 0.48
SGPP1-201ENST00000247225 RWDD2BP57060 319 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 APOBEC3HQ6NTF7 200 aaKnown RBP18.05■□□□□ 0.48
SGPP1-201ENST00000247225 ARHGAP27Q6ZUM4 889 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 C1orf186Q6ZWK4 172 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 INTS8Q75QN2 995 aaKnown RBP18.05■□□□□ 0.48
SGPP1-201ENST00000247225 FAM20AQ96MK3 541 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 KLF6Q99612 283 aaPredicted RBP18.05■□□□□ 0.48
SGPP1-201ENST00000247225 PITPNM3Q9BZ71 974 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 SLCO1B3Q9NPD5 702 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 PRR12Q9ULL5 1215 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.05■□□□□ 0.48
SGPP1-201ENST00000247225 GOLGA8RI6L899 631 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 PPEF1O14829 653 aaPredicted RBP18.05■□□□□ 0.48
SGPP1-201ENST00000247225 PSMC4P43686 418 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 SPATA21Q7Z572 469 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 YIPF3Q9GZM5 350 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 UNC45AQ9H3U1 944 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 VPS37BQ9H9H4 285 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 IRS2Q9Y4H2 1338 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 A0A0A6YYK5 440 aaPredicted RBP18.05■□□□□ 0.48
SGPP1-201ENST00000247225 RASA4BC9J798 803 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 SLC16A3O15427 465 aaKnown RBP18.05■□□□□ 0.48
SGPP1-201ENST00000247225 RASA4O43374 803 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 ZBTB48P10074 688 aaPredicted RBP18.05■□□□□ 0.48
SGPP1-201ENST00000247225 ATF2P15336 505 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 PLA2G4FQ68DD2 849 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 OTOP1Q7RTM1 612 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 FITM2Q8N6M3 262 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 BICD1Q96G01 975 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 VAV3Q9UKW4 847 aa18.05■□□□□ 0.48
SGPP1-201ENST00000247225 PODXLO00592 558 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 GAP43P17677 238 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 LACTBP83111 547 aaPredicted RBP18.04■□□□□ 0.48
SGPP1-201ENST00000247225 EMC10Q5UCC4 262 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 MIER3Q7Z3K6 550 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 STMN4Q9H169 189 aaPredicted RBP18.04■□□□□ 0.48
SGPP1-201ENST00000247225 C12orf65Q9H3J6 166 aaKnown RBP18.04■□□□□ 0.48
SGPP1-201ENST00000247225 C10orf88Q9H8K7 445 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 DONSONQ9NYP3 566 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 DCTN4Q9UJW0 460 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 INTUQ9ULD6 942 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 R3HDM2Q9Y2K5 976 aaKnown RBP18.04■□□□□ 0.48
SGPP1-201ENST00000247225 C5orf60A6NFR6 353 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 ZSCAN5DPP0CG00 497 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 NCALDP61601 193 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 SLMAPQ14BN4 828 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 CSRNP1Q96S65 589 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 TMEM117Q9H0C3 514 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 ARHGEF10LQ9HCE6 1279 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 HAO1Q9UJM8 370 aa18.04■□□□□ 0.48
SGPP1-201ENST00000247225 SHANK3Q9BYB0 1731 aa18.03■□□□□ 0.48
SGPP1-201ENST00000247225 AP3B2Q13367 1082 aa18.03■□□□□ 0.48
SGPP1-201ENST00000247225 NACC1Q96RE7 527 aa18.03■□□□□ 0.48
SGPP1-201ENST00000247225 ZMYM2Q9UBW7 1377 aa18.03■□□□□ 0.48
SGPP1-201ENST00000247225 MGRN1O60291 552 aa18.03■□□□□ 0.48
SGPP1-201ENST00000247225 CYP3A4P08684 503 aa18.03■□□□□ 0.48
SGPP1-201ENST00000247225 POLR2MP0CAP2 368 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms