RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 ZNF720Q7Z2F6 126 aa18.46■□□□□ 0.55
CDKN1A-201ENST00000244741 PSPC1Q8WXF1 523 aaKnown RBP18.46■□□□□ 0.55
CDKN1A-201ENST00000244741 IFT74Q96LB3 600 aa18.46■□□□□ 0.55
CDKN1A-201ENST00000244741 TIPINQ9BVW5 301 aa18.46■□□□□ 0.55
CDKN1A-201ENST00000244741 KMT5AQ9NQR1 393 aa18.46■□□□□ 0.55
CDKN1A-201ENST00000244741 STARD7Q9NQZ5 370 aa18.46■□□□□ 0.55
CDKN1A-201ENST00000244741 TRMT13Q9NUP7 481 aaKnown RBP18.46■□□□□ 0.55
CDKN1A-201ENST00000244741 GTF2IRD1Q9UHL9 959 aa18.46■□□□□ 0.55
CDKN1A-201ENST00000244741 RAB21Q9UL25 225 aa18.46■□□□□ 0.55
CDKN1A-201ENST00000244741 OGDHLQ9ULD0 1010 aa18.46■□□□□ 0.55
CDKN1A-201ENST00000244741 DUSP10Q9Y6W6 482 aa18.46■□□□□ 0.55
CDKN1A-201ENST00000244741 MOXD2PA6NHM9 499 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 RHOXF2BP0C7M4 288 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 ZNF771Q7L3S4 317 aaPredicted RBP18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 KIAA0319LQ8IZA0 1049 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 MYOCDQ8IZQ8 938 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 NOA1Q8NC60 698 aaKnown RBP18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 DNAJB3Q8WWF6 145 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 RHOXF2Q9BQY4 288 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 OLFML3Q9NRN5 406 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 ZNF263O14978 683 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 MAGEB2O15479 319 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 KRT86O43790 486 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 SGPL1O95470 568 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 HNRNPH3P31942 346 aaKnown RBP18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 HOXD13P35453 343 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 TUBB4BP68371 445 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 ADAM17P78536 824 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 IER5Q5VY09 327 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 HAUS6Q7Z4H7 955 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 RNF149Q8NC42 400 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 DIS3LQ8TF46 1054 aaKnown RBP18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 MMRN2Q9H8L6 949 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 PLAGL2Q9UPG8 496 aa18.45■□□□□ 0.54
CDKN1A-201ENST00000244741 DNM1LO00429 736 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 ATN1P54259 1190 aaPredicted RBP18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 ZCWPW2Q504Y3 356 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 LINC01465Q8N7H1 131 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 TCP11Q8WWU5 503 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 WNT8BQ93098 351 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 IQCDQ96DY2 449 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 TSG101Q99816 390 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 TSEN34Q9BSV6 310 aaKnown RBP18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 SENP6Q9GZR1 1112 aaPredicted RBP18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 PPME1Q9Y570 386 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 MBLAC1A4D2B0 266 aaPredicted RBP18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 IPO7O95373 1038 aaKnown RBP18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 TMOD1P28289 359 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 SMTNP53814 917 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 KIZQ2M2Z5 673 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 PAPD7Q5XG87 772 aaKnown RBP18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 TMEM161BQ8NDZ6 487 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 HNRNPLLQ8WVV9 542 aaKnown RBP18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 CCDC42Q96M95 316 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 JPH2Q9BR39 696 aaPredicted RBP18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 ARHGAP20Q9P2F6 1191 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 SEL1LQ9UBV2 794 aa18.44■□□□□ 0.54
CDKN1A-201ENST00000244741 DENND3A2RUS2 1198 aa18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 TISP43B9A030 160 aa18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 SRGAP2O75044 1071 aa18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 PTGISQ16647 500 aa18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 BEND6Q5SZJ8 279 aaPredicted RBP18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 FOXR2Q6PJQ5 311 aa18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 EPM2AIP1Q7L775 607 aaPredicted RBP18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 EXOC8Q8IYI6 725 aa18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 CCDC155Q8N6L0 562 aa18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 DEPTORQ8TB45 409 aa18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 SCLT1Q96NL6 688 aa18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 TRPV6Q9H1D0 765 aa18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 PHF24Q9UPV7 400 aa18.43■□□□□ 0.54
CDKN1A-201ENST00000244741 A0A087WZ62 844 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 CABYRO75952 493 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 VAV2P52735 878 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 NCKAP1LP55160 1127 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 NLRP11P59045 1033 aaKnown RBP18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 SMC1AQ14683 1233 aaKnown RBP18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 EHBP1Q8NDI1 1231 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 FDXACB1Q9BRP7 624 aaPredicted RBP18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 CDHR5Q9HBB8 845 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 SAR1BQ9Y6B6 198 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 POLR3GO15318 223 aaPredicted RBP18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 GNAT1P11488 350 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 HOXC8P31273 242 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 MNX1P50219 401 aaPredicted RBP18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 MXD4Q14582 209 aaPredicted RBP18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 GPIHBP1Q8IV16 184 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 NLRP7Q8WX94 980 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 ABCB6Q9NP58 842 aa18.42■□□□□ 0.54
CDKN1A-201ENST00000244741 MACROD2A1Z1Q3 448 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 MAP2K7O14733 419 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 GAS2O43903 313 aaKnown RBP18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 KIF20AO95235 890 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 EIF4A3P38919 411 aaKnown RBP18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 NAMPTP43490 491 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 RTP1P59025 263 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 VSNL1P62760 191 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 FKBP3Q00688 224 aaKnown RBP18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 SPA17Q15506 151 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 RRAGAQ7L523 313 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 TAS1R3Q7RTX0 852 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms