RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 GRAMD1AQ96CP6 724 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 POP1Q99575 1024 aaKnown RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 RNPEPL1Q9HAU8 725 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 UBE2TQ9NPD8 197 aaPredicted RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 DLGAP2Q9P1A6 1054 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 ANAPC5Q9UJX4 755 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 RSPH10B2B2RC85 870 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 LIN7AO14910 233 aaPredicted RBP9.88□□□□□ -0.83
SRSF6-201ENST00000244020 SPAG7O75391 227 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 GAS8O95995 478 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 RSPH10BP0C881 870 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 VCAM1P19320 739 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 RFC4P35249 363 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 MYL7Q01449 175 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 KCNA1Q09470 495 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 DNAJC3Q13217 504 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 GIT2Q14161 759 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 NBPF5PQ86XG9 351 aaPredicted RBP9.88□□□□□ -0.83
SRSF6-201ENST00000244020 SLFN12Q8IYM2 578 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 DNAJC9Q8WXX5 260 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 ZSWIM1Q9BR11 485 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 LARSQ9P2J5 1176 aaKnown RBP9.88□□□□□ -0.83
SRSF6-201ENST00000244020 BCORQ6W2J9 1755 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 ATF2P15336 505 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 FMO5P49326 533 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 GALNTL6Q49A17 601 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 TTC27Q6P3X3 843 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 AGGF1Q8N302 714 aaeCLIP9.88□□□□□ -0.83
SRSF6-201ENST00000244020 CYTH2Q99418 400 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 AGPAT1Q99943 283 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 PCDHA2Q9Y5H9 948 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 ATMINO43313 823 aaPredicted RBP9.88□□□□□ -0.83
SRSF6-201ENST00000244020 TOM1O60784 492 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 PYGMP11217 842 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 PTGIRP43119 386 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 PHEXP78562 749 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 ARSHQ5FYA8 562 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 INTS5Q6P9B9 1019 aaKnown RBP9.88□□□□□ -0.83
SRSF6-201ENST00000244020 KCTD1Q719H9 257 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 CYFIP1Q7L576 1253 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 CATSPER3Q86XQ3 398 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 CLEC10AQ8IUN9 316 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 ADGRF4Q8IZF3 695 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 ARHGAP24Q8N264 748 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 LRRC8CQ8TDW0 803 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 STK32AQ8WU08 396 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 MAGEB18Q96M61 343 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 MYLK2Q9H1R3 596 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 RIOX1Q9H6W3 641 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 SYNCQ9H7C4 482 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 NKX1-2Q9UD57 310 aaPredicted RBP9.88□□□□□ -0.83
SRSF6-201ENST00000244020 PCYOX1Q9UHG3 505 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 KIF13AQ9H1H9 1805 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 BHMG1C9JSJ3 638 aaPredicted RBP9.88□□□□□ -0.83
SRSF6-201ENST00000244020 POC1B-GALNT4F8VUJ3 575 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 GJB6O95452 261 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 GGPS1O95749 300 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 SKIP12755 728 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 SMARCA1P28370 1054 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 JAM2P57087 298 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 PPATQ06203 517 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 CUL3Q13618 768 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 MFSD5Q6N075 450 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 CAPN12Q6ZSI9 719 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 TMEM109Q9BVC6 243 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 INTS2Q9H0H0 1204 aaKnown RBP9.88□□□□□ -0.83
SRSF6-201ENST00000244020 DNAJC5Q9H3Z4 198 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 ANLNQ9NQW6 1124 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 ZC4H2Q9NQZ6 224 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 COG5Q9UP83 839 aa9.88□□□□□ -0.83
SRSF6-201ENST00000244020 CICQ96RK0 1608 aaPredicted RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 ANKRD63C9JTQ0 380 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 FOXN3O00409 490 aaPredicted RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 SLC16A3O15427 465 aaKnown RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 CLDN3O15551 220 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 TPD52L2O43399 206 aaKnown RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 DCTN3O75935 186 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 LINGO3P0C6S8 592 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 RRP1BQ14684 758 aaKnown RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 GRAMD4Q6IC98 578 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 TTBK2Q6IQ55 1244 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 DPP8Q6V1X1 898 aaPredicted RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 STXBP4Q6ZWJ1 553 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 ECHDC2Q86YB7 292 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 SLC13A5Q86YT5 568 aaPredicted RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 ANKRD27Q96NW4 1050 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 TRPM3Q9HCF6 1732 aaPredicted RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 SIX2Q9NPC8 291 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 APEX2Q9UBZ4 518 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 LOC102724428A0A0B4J2F2 783 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 CHMP2AO43633 222 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 AHCYL1O43865 530 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 ABL2P42684 1182 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 SIK1P57059 783 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 SF3B3Q15393 1217 aaKnown RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 C11orf91Q3C1V1 193 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 NSMFQ6X4W1 530 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 PALB2Q86YC2 1186 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 ART4Q93070 314 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 BTBD6Q96KE9 485 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms