RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 PRAMEF1O95521 474 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 ITGAVP06756 1048 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 TPM1P09493 284 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 PBX1P40424 430 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 GRAPQ13588 217 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 ZNF174Q15697 407 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 ZNF827Q17R98 1081 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 UTP14CQ5TAP6 766 aaKnown RBP8.78□□□□□ -1
CXCR4-201ENST00000241393 TRIM59Q8IWR1 403 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 GRAMD1CQ8IYS0 662 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 BLIDQ8IZY5 108 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 GRAPLQ8TC17 118 aaPredicted RBP8.78□□□□□ -1
CXCR4-201ENST00000241393 GTPBP4Q9BZE4 634 aaKnown RBP8.78□□□□□ -1
CXCR4-201ENST00000241393 MCM9Q9NXL9 1143 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 APEX2Q9UBZ4 518 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 ADD3Q9UEY8 706 aaKnown RBP8.78□□□□□ -1
CXCR4-201ENST00000241393 A0A1W2PQU0 124 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 VWA3AA6NCI4 1184 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 SMARCA1P28370 1054 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 PCBP3P57721 371 aaKnown RBP8.78□□□□□ -1
CXCR4-201ENST00000241393 TRIM14Q14142 442 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 PPP2R5DQ14738 602 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 PIK3AP1Q6ZUJ8 805 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 ZDHHC13Q8IUH4 622 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 SCUBE1Q8IWY4 988 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 MAGEF1Q9HAY2 307 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 SAMSN1Q9NSI8 373 aaKnown RBP8.78□□□□□ -1
CXCR4-201ENST00000241393 TMEM260Q9NX78 707 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 TFCP2L1Q9NZI6 479 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 LIMA1Q9UHB6 759 aaKnown RBP8.78□□□□□ -1
CXCR4-201ENST00000241393 RWDD2AQ9UIY3 292 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 RNF112Q9ULX5 631 aa8.78□□□□□ -1
CXCR4-201ENST00000241393 XDHP47989 1333 aa8.77□□□□□ -1
CXCR4-201ENST00000241393 BTAF1O14981 1849 aa8.77□□□□□ -1
CXCR4-201ENST00000241393 THSD7AQ9UPZ6 1657 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 EFCAB8A8MWE9 144 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 PRR33A8MZF0 331 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 CYP2D6P10635 497 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 H2AFXP16104 143 aaPredicted RBP8.77□□□□□ -1.01
CXCR4-201ENST00000241393 PRPHP41219 470 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 AFMP43652 599 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 TFAP4Q01664 338 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 ORC2Q13416 577 aaPredicted RBP8.77□□□□□ -1.01
CXCR4-201ENST00000241393 TUBB2AQ13885 445 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 KCNB1Q14721 858 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 TCEA2Q15560 299 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 ELF2Q15723 593 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 FAM47AQ5JRC9 791 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 ZNF658Q5TYW1 1059 aaPredicted RBP8.77□□□□□ -1.01
CXCR4-201ENST00000241393 ZNF804AQ7Z570 1209 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 TMC3Q7Z5M5 1100 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 TSPYL5Q86VY4 417 aaPredicted RBP8.77□□□□□ -1.01
CXCR4-201ENST00000241393 CNGA4Q8IV77 575 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 C4orf32Q8N8J7 132 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 FAM181AQ8N9Y4 354 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 ANKRD20A12PQ8NF67 263 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 ASB11Q8WXH4 323 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 ZDHHC15Q96MV8 337 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 TUBB2BQ9BVA1 445 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 CCSER1Q9C0I3 900 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 CUEDC2Q9H467 287 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 FAM53CQ9NYF3 392 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 SRP68Q9UHB9 627 aaKnown RBP8.77□□□□□ -1.01
CXCR4-201ENST00000241393 CCNL1Q9UK58 526 aaPredicted RBP8.77□□□□□ -1.01
CXCR4-201ENST00000241393 PTCH2Q9Y6C5 1203 aa8.77□□□□□ -1.01
CXCR4-201ENST00000241393 hCG_1642624A0A1W2PR95 340 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 NMT2O60551 498 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 KCNH1O95259 989 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 CPP00450 1065 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 CCDC175P0C221 793 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 FGFR1P11362 822 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 SRFP11831 508 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 HOXC12P31275 282 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 PPP2R2AP63151 447 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 FAM193AP78312 1265 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 GABPB1Q06547 395 aaPredicted RBP8.76□□□□□ -1.01
CXCR4-201ENST00000241393 PAK1Q13153 545 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 C16orf86Q6ZW13 317 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 SPACA3Q8IXA5 215 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 IGSF22Q8N9C0 903 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 CCDC12Q8WUD4 166 aaPredicted RBP8.76□□□□□ -1.01
CXCR4-201ENST00000241393 HRASLS5Q96KN8 279 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 SPZ1Q9BXG8 430 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 HDAC8Q9BY41 377 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 IL17RBQ9NRM6 502 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 LY75O60449 1722 aa8.76□□□□□ -1.01
CXCR4-201ENST00000241393 CCDC194A0A1B0GVG4 234 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 H7C1D1 291 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 MFAP3LO75121 409 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 TADA3O75528 432 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 ZSCAN20P17040 1043 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 HOXA7P31268 230 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 CASQ1P31415 396 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 MCM7P33993 719 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 PPP1R2P41236 205 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 SUMO1P63165 101 aaKnown RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 TUBB4BP68371 445 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 CBX1P83916 185 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 FBXO38Q6PIJ6 1188 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 RNF111Q6ZNA4 994 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms