RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TMEM139Q8IV31 216 aa14.4□□□□□ -0.1
SLIRP-201ENST00000238688 CCAR2Q8N163 923 aaKnown RBP14.4□□□□□ -0.1
SLIRP-201ENST00000238688 TXLNBQ8N3L3 684 aa14.4□□□□□ -0.1
SLIRP-201ENST00000238688 TMEM161BQ8NDZ6 487 aa14.4□□□□□ -0.1
SLIRP-201ENST00000238688 DHX38Q92620 1227 aaKnown RBP14.4□□□□□ -0.1
SLIRP-201ENST00000238688 SPATA33Q96N06 139 aa14.4□□□□□ -0.1
SLIRP-201ENST00000238688 ERAP1Q9NZ08 941 aa14.4□□□□□ -0.1
SLIRP-201ENST00000238688 ARHGAP28Q9P2N2 729 aa14.4□□□□□ -0.1
SLIRP-201ENST00000238688 CHD7Q9P2D1 2997 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 ASAP2O43150 1006 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 PPFIA4O75335 1185 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 MAFO75444 373 aaPredicted RBP14.39□□□□□ -0.11
SLIRP-201ENST00000238688 F2P00734 622 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 PIGRP01833 764 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 IQCF3P0C7M6 154 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 GARTP22102 1010 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 ANXA13P27216 316 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 CASP14P31944 242 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 NPEPPSP55786 919 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 PEX3P56589 373 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 POU5F1BQ06416 359 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 CETN1Q12798 172 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 HSDL1Q3SXM5 330 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 IER5Q5VY09 327 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 PLA2G4FQ68DD2 849 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 FAM186BQ8IYM0 893 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 CCDC170Q8IYT3 715 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 NEK11Q8NG66 645 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 TIFAQ96CG3 184 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 ZNF576Q9H609 170 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 TMEM134Q9H6X4 195 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 CEP72Q9P209 647 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 ZNF215Q9UL58 517 aaPredicted RBP14.39□□□□□ -0.11
SLIRP-201ENST00000238688 TBX20Q9UMR3 447 aa14.39□□□□□ -0.11
SLIRP-201ENST00000238688 IGKV6-21A0A0C4DH24 114 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 SFI1A8K8P3 1242 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 MAGEB2O15479 319 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 SORBS3O60504 671 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 KRT13P13646 458 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 ARL2P36404 184 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 PSEN2P49810 448 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 DGKDQ16760 1214 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 ZNF484Q5JVG2 852 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 SLFN12LQ6IEE8 588 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 RPUSD2Q8IZ73 545 aaKnown RBP14.38□□□□□ -0.11
SLIRP-201ENST00000238688 ZNF710Q8N1W2 664 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 XXYLT1Q8NBI6 393 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 GLG1Q92896 1179 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 BORCS6Q96GS4 357 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 CEP89Q96ST8 783 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 PCYT2Q99447 389 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 C16orf70Q9BSU1 422 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 C2orf40Q9H1Z8 148 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 XPNPEP1Q9NQW7 623 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 HDAC6Q9UBN7 1215 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 GTF2IRD1Q9UHL9 959 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 PLAGL2Q9UPG8 496 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 YBX2Q9Y2T7 364 aaKnown RBP14.38□□□□□ -0.11
SLIRP-201ENST00000238688 TELO2Q9Y4R8 837 aa14.38□□□□□ -0.11
SLIRP-201ENST00000238688 TTC26A0AVF1 554 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 AKAP3O75969 853 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 IPO7O95373 1038 aaKnown RBP14.37□□□□□ -0.11
SLIRP-201ENST00000238688 CCDC175P0C221 793 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 ZNF286BP0CG31 522 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 ATP4AP20648 1035 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 GTF2H1P32780 548 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 CDC42EP1Q00587 391 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 KCNH2Q12809 1159 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 STRN3Q13033 797 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 PTGISQ16647 500 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 TRIM71Q2Q1W2 868 aaKnown RBP14.37□□□□□ -0.11
SLIRP-201ENST00000238688 MTERF2Q49AM1 385 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 ZC2HC1CQ53FD0 456 aaPredicted RBP14.37□□□□□ -0.11
SLIRP-201ENST00000238688 TRAF7Q6Q0C0 670 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 GBP6Q6ZN66 633 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 ZNF662Q6ZS27 426 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 DEFB128Q7Z7B8 93 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 WNT8BQ93098 351 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 SLC35C1Q96A29 364 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 PRIMPOLQ96LW4 560 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 PCMTD1Q96MG8 357 aaPredicted RBP14.37□□□□□ -0.11
SLIRP-201ENST00000238688 NFKBIZQ9BYH8 718 aa14.37□□□□□ -0.11
SLIRP-201ENST00000238688 POLR3FQ9H1D9 316 aaPredicted RBP14.37□□□□□ -0.11
SLIRP-201ENST00000238688 DENND3A2RUS2 1198 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 CCDC169A6NNP5 214 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 EXOC3O60645 756 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 LDHAP00338 332 aaKnown RBP14.36□□□□□ -0.11
SLIRP-201ENST00000238688 MYOGP15173 224 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 CYLC1P35663 651 aaPredicted RBP14.36□□□□□ -0.11
SLIRP-201ENST00000238688 RABGGTBP53611 331 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 ADKP55263 362 aaKnown RBP14.36□□□□□ -0.11
SLIRP-201ENST00000238688 CHMP4BP1P59074 171 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 ZNF200P98182 395 aaPredicted RBP14.36□□□□□ -0.11
SLIRP-201ENST00000238688 SP4Q02446 784 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 BFSP1Q12934 665 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 TFDP1Q14186 410 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 MFSD10Q14728 455 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 EXOC3L4Q17RC7 722 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 KIAA0753Q2KHM9 967 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms