RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 LRRC19Q9H756 370 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 RXFP1Q9HBX9 757 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 TUFT1Q9NNX1 390 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 SEL1LQ9UBV2 794 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 EMSYQ7Z589 1322 aa16.64■□□□□ 0.25
DDX55-201ENST00000238146 IGLV3-22A0A075B6J6 115 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 C6orf229H3BNL8 230 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 SPOPO43791 374 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 CHKAP35790 457 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 LLGL1Q15334 1064 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 ODR4Q5SWX8 454 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 GDAP1Q8TB36 358 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 TRIM33Q9UPN9 1127 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 STK38LQ9Y2H1 464 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 FAM196BA6NMK8 535 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 CHMP2AO43633 222 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 CHRNB2P17787 502 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 MSH2P43246 934 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 NFIAQ12857 509 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 ZKSCAN8Q15776 578 aaPredicted RBP16.63■□□□□ 0.25
DDX55-201ENST00000238146 CDC42EP5Q6NZY7 148 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 RHBDF2Q6PJF5 856 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 RNF207Q6ZRF8 634 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 STXBP4Q6ZWJ1 553 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 ERICH1Q86X53 443 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 SLC9A9Q8IVB4 645 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 IFT74Q96LB3 600 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 RMDN2Q96LZ7 410 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 WHRNQ9P202 907 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 SKAP2O75563 359 aaPredicted RBP16.63■□□□□ 0.25
DDX55-201ENST00000238146 SGPL1O95470 568 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 CYP3A4P08684 503 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 PPP3CAQ08209 521 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 CRY2Q49AN0 593 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 SIAH1Q8IUQ4 282 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 ZFPM1Q8IX07 1006 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 KAT5Q92993 513 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 PLCD4Q9BRC7 762 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 NYAP2Q9P242 653 aa16.63■□□□□ 0.25
DDX55-201ENST00000238146 SPATA31A6Q5VVP1 1343 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 DLATP10515 647 aaKnown RBP16.62■□□□□ 0.25
DDX55-201ENST00000238146 BRAFP15056 766 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 ATP5DP30049 168 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 SCNN1DP51172 638 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 KRT17Q04695 432 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 MGAT5Q09328 741 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 CGB2Q6NT52 195 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 ZNF564Q8TBZ8 553 aaPredicted RBP16.62■□□□□ 0.25
DDX55-201ENST00000238146 C1orf54Q8WWF1 131 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 SLCO2A1Q92959 643 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 ACP6Q9NPH0 428 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 SLC5A4Q9NY91 659 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 CCNL1Q9UK58 526 aaPredicted RBP16.62■□□□□ 0.25
DDX55-201ENST00000238146 CLDN3O15551 220 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 TTC4O95801 387 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 GZMAP12544 262 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 RWDD2BP57060 319 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 KYNUQ16719 465 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 NOP9Q86U38 636 aaKnown RBP16.62■□□□□ 0.25
DDX55-201ENST00000238146 SYCP3Q8IZU3 236 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 EPS8L1Q8TE68 723 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 TGS1Q96RS0 853 aaKnown RBP16.62■□□□□ 0.25
DDX55-201ENST00000238146 WDR18Q9BV38 432 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 NUP85Q9BW27 656 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 ADAM22Q9P0K1 906 aa16.62■□□□□ 0.25
DDX55-201ENST00000238146 WRAP73Q9P2S5 460 aaPredicted RBP16.62■□□□□ 0.25
DDX55-201ENST00000238146 NOCTQ9UK39 431 aaKnown RBP16.62■□□□□ 0.25
DDX55-201ENST00000238146 PSMD10O75832 226 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 IVDP26440 423 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 CYP4X1Q8N118 509 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 ANKLE1Q8NAG6 615 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 CERKQ8TCT0 537 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 STRA6Q9BX79 667 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 DNAJC17Q9NVM6 304 aaKnown RBP16.61■□□□□ 0.25
DDX55-201ENST00000238146 HGSO14964 777 aaPredicted RBP16.61■□□□□ 0.25
DDX55-201ENST00000238146 ITIH2P19823 946 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 PDE6BP35913 854 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 GCLMP48507 274 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 SNX1Q13596 522 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 EPC2Q52LR7 807 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 LRCH2Q5VUJ6 765 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 PSPC1Q8WXF1 523 aaKnown RBP16.61■□□□□ 0.25
DDX55-201ENST00000238146 VTI1AQ96AJ9 217 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 PCIF1Q9H4Z3 704 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 ASIC3Q9UHC3 531 aa16.61■□□□□ 0.25
DDX55-201ENST00000238146 F5H6K3 240 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 FSCN2O14926 492 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 RIMBP2O15034 1052 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 CYP1A2P05177 515 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 CCNB1P14635 433 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 FAM98CQ17RN3 349 aaKnown RBP16.6■□□□□ 0.25
DDX55-201ENST00000238146 SGO2Q562F6 1265 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 SYDE2Q5VT97 1194 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 C7orf43Q8WVR3 580 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 CNKSR1Q969H4 720 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 SLC24A3Q9HC58 644 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 SUGT1Q9Y2Z0 365 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 TISP43B9A030 160 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 CLGNO14967 610 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 CDC25CP30307 473 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms