RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CCDC137Q6PK04 289 aaKnown RBP17.5■□□□□ 0.39
LTBR-201ENST00000228918 SUPT20HQ8NEM7 779 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 CLEC4DQ8WXI8 215 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 SHC3Q92529 594 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 TATDN2Q93075 761 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 PGM2Q96G03 612 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 H0YHG0 523 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 CYP26A1O43174 497 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 TBC1D12O60347 775 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 PYGMP11217 842 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 YWHABP31946 246 aaKnown RBP17.5■□□□□ 0.39
LTBR-201ENST00000228918 CDR1P51861 262 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 ACTN3Q08043 901 aaPredicted RBP17.5■□□□□ 0.39
LTBR-201ENST00000228918 PLCB4Q15147 1175 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 DLGAP5Q15398 846 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 SLC47A2Q86VL8 602 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 PPM1KQ8N3J5 372 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 ZNF564Q8TBZ8 553 aaPredicted RBP17.5■□□□□ 0.39
LTBR-201ENST00000228918 CENPTQ96BT3 561 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 SEC16BQ96JE7 1060 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 SH2D3AQ9BRG2 576 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 ACP6Q9NPH0 428 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 PARP2Q9UGN5 583 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 RGPD3A6NKT7 1758 aaPredicted RBP17.5■□□□□ 0.39
LTBR-201ENST00000228918 RGPD4Q7Z3J3 1758 aa17.5■□□□□ 0.39
LTBR-201ENST00000228918 ASTN2O75129 1339 aaPredicted RBP17.49■□□□□ 0.39
LTBR-201ENST00000228918 TMEM150BA6NC51 233 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 GOLGA8IPA6NC78 632 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 GOLGA8JA6NMD2 632 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 BACH1O14867 736 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 SLC16A4O15374 487 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 CYP1A2P05177 515 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 MMEP08473 750 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 PSEN1P49768 467 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 PEX3P56589 373 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 MRPS9P82933 396 aaKnown RBP17.49■□□□□ 0.39
LTBR-201ENST00000228918 GHRHRQ02643 423 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 UGCGQ16739 394 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 ERMARDQ5T6L9 678 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 PCNX4Q63HM2 1172 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 CPNE8Q86YQ8 564 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 SLC13A5Q86YT5 568 aaPredicted RBP17.49■□□□□ 0.39
LTBR-201ENST00000228918 SEMA4DQ92854 862 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 IWS1Q96ST2 819 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 TIPINQ9BVW5 301 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 NUP85Q9BW27 656 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 GPRC5CQ9NQ84 441 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 MTRF1LQ9UGC7 380 aaKnown RBP17.49■□□□□ 0.39
LTBR-201ENST00000228918 GTF3C4Q9UKN8 822 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 CCDC169A6NNP5 214 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 MFAP3P55082 362 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 MAP2K1Q02750 393 aaPredicted RBP17.49■□□□□ 0.39
LTBR-201ENST00000228918 MIGA2Q7L4E1 593 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 CBWD2Q8IUF1 395 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 MDM1Q8TC05 714 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 XPO6Q96QU8 1125 aaKnown RBP17.49■□□□□ 0.39
LTBR-201ENST00000228918 FAM129AQ9BZQ8 928 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 TMEM39BQ9GZU3 492 aa17.49■□□□□ 0.39
LTBR-201ENST00000228918 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.49■□□□□ 0.39
LTBR-201ENST00000228918 TCRBV7S2A1N4TA0A589 114 aa17.48■□□□□ 0.39
LTBR-201ENST00000228918 DRD4P21917 467 aa17.48■□□□□ 0.39
LTBR-201ENST00000228918 COILP38432 576 aaPredicted RBP17.48■□□□□ 0.39
LTBR-201ENST00000228918 MTMR1Q13613 665 aa17.48■□□□□ 0.39
LTBR-201ENST00000228918 SLC29A2Q14542 456 aa17.48■□□□□ 0.39
LTBR-201ENST00000228918 SIX1Q15475 284 aaPredicted RBP17.48■□□□□ 0.39
LTBR-201ENST00000228918 SNRNP35Q16560 246 aaKnown RBP17.48■□□□□ 0.39
LTBR-201ENST00000228918 CCDC121Q6ZUS5 278 aa17.48■□□□□ 0.39
LTBR-201ENST00000228918 CCDC13Q8IYE1 715 aa17.48■□□□□ 0.39
LTBR-201ENST00000228918 CACNA2D3Q8IZS8 1091 aa17.48■□□□□ 0.39
LTBR-201ENST00000228918 ZNF653Q96CK0 615 aa17.48■□□□□ 0.39
LTBR-201ENST00000228918 BTBD6Q96KE9 485 aa17.48■□□□□ 0.39
LTBR-201ENST00000228918 GMLQ99445 158 aa17.48■□□□□ 0.39
LTBR-201ENST00000228918 VEZTQ9HBM0 779 aa17.48■□□□□ 0.39
LTBR-201ENST00000228918 CNOT7Q9UIV1 285 aaKnown RBP17.48■□□□□ 0.39
LTBR-201ENST00000228918 SPOPO43791 374 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 ADSSP30520 456 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 MMP13P45452 471 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 TBC1D10BQ4KMP7 808 aaPredicted RBP17.47■□□□□ 0.39
LTBR-201ENST00000228918 UBAP2Q5T6F2 1119 aaKnown RBP17.47■□□□□ 0.39
LTBR-201ENST00000228918 KRT39Q6A163 491 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 C4orf19Q8IY42 314 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 C12orf50Q8NA57 414 aaPredicted RBP17.47■□□□□ 0.39
LTBR-201ENST00000228918 CABS1Q96KC9 395 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 RUNDC3BQ96NL0 473 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 SEMA4AQ9H3S1 761 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 MTUS1Q9ULD2 1270 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 GOLGB1Q14789 3259 aaKnown RBP17.47■□□□□ 0.39
LTBR-201ENST00000228918 ANKRD63C9JTQ0 380 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 CYP11B1P15538 503 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 MCF2L2Q86YR7 1114 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 GPATCH11Q8N954 259 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 SLC17A8Q8NDX2 589 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 HELQQ8TDG4 1101 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 OSBPL7Q9BZF2 842 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 ADAM7Q9H2U9 754 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 AZI2Q9H6S1 392 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 ACTR5Q9H9F9 607 aaPredicted RBP17.47■□□□□ 0.39
LTBR-201ENST00000228918 TBC1D22BQ9NU19 505 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 UVRAGQ9P2Y5 699 aa17.47■□□□□ 0.39
LTBR-201ENST00000228918 COQ4Q9Y3A0 265 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms