RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 THPOP40225 353 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 SULT1E1P49888 294 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 CDC42EP1Q00587 391 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 TAF1BQ53T94 588 aaPredicted RBP19.61■□□□□ 0.73
CLIP2-201ENST00000223398 TTC13Q8NBP0 860 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 SDCCAG3Q96C92 435 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 DYRK4Q9NR20 520 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 TAF6LQ9Y6J9 622 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 CAPN7Q9Y6W3 813 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 ZC3H4Q9UPT8 1303 aaKnown RBP19.61■□□□□ 0.73
CLIP2-201ENST00000223398 ATF7IP2Q5U623 682 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 RMDN1Q96DB5 314 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 PRG3Q9Y2Y8 225 aaPredicted RBP19.61■□□□□ 0.73
CLIP2-201ENST00000223398 SYNGAP1Q96PV0 1343 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 SUN1O94901 812 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 ZC3H18Q86VM9 953 aaKnown RBP19.61■□□□□ 0.73
CLIP2-201ENST00000223398 FAM49BQ9NUQ9 324 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 IQANK1A0A1B0GTG1 560 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 RGS2P41220 211 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 ATN1P54259 1190 aaPredicted RBP19.6■□□□□ 0.73
CLIP2-201ENST00000223398 NLRP11P59045 1033 aaKnown RBP19.6■□□□□ 0.73
CLIP2-201ENST00000223398 MGAT5BQ3V5L5 792 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 TAS2R42Q7RTR8 314 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 SLC30A5Q8TAD4 765 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 ZNF512Q96ME7 567 aaPredicted RBP19.6■□□□□ 0.73
CLIP2-201ENST00000223398 ALDH8A1Q9H2A2 487 aaPredicted RBP19.6■□□□□ 0.73
CLIP2-201ENST00000223398 RGL2O15211 777 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 NCOA4Q13772 614 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 ZNF235Q14590 738 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 NPTXRO95502 500 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 TTC4O95801 387 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 SNRNP35Q16560 246 aaKnown RBP19.6■□□□□ 0.73
CLIP2-201ENST00000223398 SMAP1Q8IYB5 467 aaPredicted RBP19.6■□□□□ 0.73
CLIP2-201ENST00000223398 PGBD3Q8N328 593 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.6■□□□□ 0.73
CLIP2-201ENST00000223398 AKT1S1Q96B36 256 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 FRMD5Q7Z6J6 570 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 KIFC3Q9BVG8 833 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 CEP170BQ9Y4F5 1589 aaPredicted RBP19.6■□□□□ 0.73
CLIP2-201ENST00000223398 GSTA4O15217 222 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 EVI5O60447 810 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 MUM1Q2TAK8 710 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 METTL16Q86W50 562 aaKnown RBP19.6■□□□□ 0.73
CLIP2-201ENST00000223398 CPA5Q8WXQ8 436 aa19.6■□□□□ 0.73
CLIP2-201ENST00000223398 KRT7P08729 469 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 ENOSF1Q7L5Y1 443 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 ERO1BQ86YB8 467 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 PARD6BQ9BYG5 372 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 VPS11Q9H270 941 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 CNTNAP5Q8WYK1 1306 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 H3BRJ5 948 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 GNGT2O14610 69 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 SNX2O60749 519 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 CLTAP09496 248 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 RAD51Q06609 339 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 PLEKHA5Q9HAU0 1116 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 KLK14Q9P0G3 267 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 PDS5AQ29RF7 1337 aaKnown RBP19.59■□□□□ 0.73
CLIP2-201ENST00000223398 MYMKA6NI61 221 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 HBP1O60381 514 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 CHEK2O96017 543 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 CYBBP04839 570 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 LAMC2Q13753 1193 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 CCDC38Q502W7 563 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 PLEKHH3Q7Z736 793 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 PDZD8Q8NEN9 1154 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 OR6P1Q8NGX9 317 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 PCDHB7Q9Y5E2 793 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 E5RI56 91 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 ESRRBO95718 433 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 ZSCAN26Q16670 478 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 SYCP2LQ5T4T6 812 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 MAML1Q92585 1016 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 SPDL1Q96EA4 605 aa19.59■□□□□ 0.73
CLIP2-201ENST00000223398 UBA6A0AVT1 1052 aaPredicted RBP19.58■□□□□ 0.73
CLIP2-201ENST00000223398 RFC5P40937 340 aa19.58■□□□□ 0.73
CLIP2-201ENST00000223398 OCRLQ01968 901 aa19.58■□□□□ 0.73
CLIP2-201ENST00000223398 NFRKBQ6P4R8 1299 aa19.58■□□□□ 0.73
CLIP2-201ENST00000223398 TTC17Q96AE7 1141 aa19.58■□□□□ 0.73
CLIP2-201ENST00000223398 TMEM60Q9H2L4 133 aa19.58■□□□□ 0.73
CLIP2-201ENST00000223398 MAD2L2Q9UI95 211 aa19.58■□□□□ 0.73
CLIP2-201ENST00000223398 MEGF6O75095 1541 aa19.58■□□□□ 0.73
CLIP2-201ENST00000223398 C17orf102A2RUQ5 167 aa19.58■□□□□ 0.73
CLIP2-201ENST00000223398 POU5F1BQ06416 359 aa19.58■□□□□ 0.73
CLIP2-201ENST00000223398 FBXO16Q8IX29 292 aaPredicted RBP19.58■□□□□ 0.73
CLIP2-201ENST00000223398 CEP120Q8N960 986 aa19.58■□□□□ 0.73
CLIP2-201ENST00000223398 THOC1Q96FV9 657 aaKnown RBP19.58■□□□□ 0.73
CLIP2-201ENST00000223398 GRAP2O75791 330 aa19.58■□□□□ 0.72
CLIP2-201ENST00000223398 HDLBPQ00341 1268 aaKnown RBP19.58■□□□□ 0.72
CLIP2-201ENST00000223398 NNTQ13423 1086 aa19.58■□□□□ 0.72
CLIP2-201ENST00000223398 PPWD1Q96BP3 646 aaKnown RBP19.58■□□□□ 0.72
CLIP2-201ENST00000223398 OPTNQ96CV9 577 aa19.58■□□□□ 0.72
CLIP2-201ENST00000223398 TIPINQ9BVW5 301 aa19.58■□□□□ 0.72
CLIP2-201ENST00000223398 CCSER1Q9C0I3 900 aa19.58■□□□□ 0.72
CLIP2-201ENST00000223398 CYP26B1Q9NR63 512 aa19.58■□□□□ 0.72
CLIP2-201ENST00000223398 PARVAQ9NVD7 372 aa19.58■□□□□ 0.72
CLIP2-201ENST00000223398 TBX3O15119 743 aa19.58■□□□□ 0.72
CLIP2-201ENST00000223398 CFLARO15519 480 aa19.58■□□□□ 0.72
CLIP2-201ENST00000223398 ROR1Q01973 937 aa19.58■□□□□ 0.72
CLIP2-201ENST00000223398 AGPAT1Q99943 283 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms