RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 PLS3P13797 630 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 HSD17B4P51659 736 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 MRPS9P82933 396 aaKnown RBP16.44■□□□□ 0.22
TGFB1-201ENST00000221930 BIRC3Q13489 604 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 FAM160B2Q86V87 743 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 JAMLQ86YT9 394 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 RHOT2Q8IXI1 618 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 NIM1KQ8IY84 436 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 ARFGAP2Q8N6H7 521 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 NAP1L3Q99457 506 aaPredicted RBP16.44■□□□□ 0.22
TGFB1-201ENST00000221930 ZNF341Q9BYN7 854 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 TMEM117Q9H0C3 514 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 TMEM206Q9H813 350 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 COL4A5P29400 1685 aa16.44■□□□□ 0.22
TGFB1-201ENST00000221930 KIAA0754O94854 1291 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 EIF2AK2P19525 551 aaKnown RBP16.43■□□□□ 0.22
TGFB1-201ENST00000221930 COMTP21964 271 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 YWHABP31946 246 aaKnown RBP16.43■□□□□ 0.22
TGFB1-201ENST00000221930 QARSP47897 775 aaKnown RBP16.43■□□□□ 0.22
TGFB1-201ENST00000221930 MXI1P50539 228 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 GPC5P78333 572 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 TKFCQ3LXA3 575 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 UBAP2Q5T6F2 1119 aaKnown RBP16.43■□□□□ 0.22
TGFB1-201ENST00000221930 PLA2G4FQ68DD2 849 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 CBWD2Q8IUF1 395 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 EPS8L1Q8TE68 723 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 SAAL1Q96ER3 474 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 TRIM6Q9C030 488 aaPredicted RBP16.43■□□□□ 0.22
TGFB1-201ENST00000221930 ZDHHC18Q9NUE0 388 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 DIS3Q9Y2L1 958 aaKnown RBP16.43■□□□□ 0.22
TGFB1-201ENST00000221930 TCRBV7S2A1N4TA0A589 114 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 MEFVO15553 781 aaPredicted RBP16.43■□□□□ 0.22
TGFB1-201ENST00000221930 ICAM1P05362 532 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 ADRB2P07550 413 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 PAX7P23759 505 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 RPS12P25398 132 aaKnown RBP16.43■□□□□ 0.22
TGFB1-201ENST00000221930 PPP2R2AP63151 447 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 GRIK3Q13003 919 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 IFT88Q13099 833 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 MTMR1Q13613 665 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 RNF187Q5TA31 235 aaPredicted RBP16.43■□□□□ 0.22
TGFB1-201ENST00000221930 MDM1Q8TC05 714 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 SMIM23A6NLE4 172 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 CAND2O75155 1236 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 PPFIA2O75334 1257 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 MMEP08473 750 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 DPEP1P16444 411 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 CHRNB2P17787 502 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 RFX1P22670 979 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 PTGER2P43116 358 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 AP1ARQ63HQ0 302 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 TTC27Q6P3X3 843 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 PRELID2Q8N945 189 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 SEMA4DQ92854 862 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 KREMEN1Q96MU8 473 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 SLC24A3Q9HC58 644 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 AGO4Q9HCK5 861 aaKnown RBP16.43■□□□□ 0.22
TGFB1-201ENST00000221930 PIM2Q9P1W9 311 aa16.43■□□□□ 0.22
TGFB1-201ENST00000221930 ATP9AO75110 1047 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 PYGMP11217 842 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 TNIP1Q15025 636 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 FAM102BQ5T8I3 360 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 CHADLQ6NUI6 762 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 UBL4BQ8N7F7 174 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 UHMK1Q8TAS1 419 aaKnown RBP16.42■□□□□ 0.22
TGFB1-201ENST00000221930 CLEC4DQ8WXI8 215 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 CYFIP2Q96F07 1278 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 FAM84AQ96KN4 292 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 ZSWIM1Q9BR11 485 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 TXLNGYQ9BZA5 131 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 EPB41L4BQ9H329 900 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 RAVER2Q9HCJ3 691 aaKnown RBP16.42■□□□□ 0.22
TGFB1-201ENST00000221930 ZNF277Q9NRM2 450 aaPredicted RBP16.42■□□□□ 0.22
TGFB1-201ENST00000221930 PTPN22Q9Y2R2 807 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 CAPN7Q9Y6W3 813 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 TLDC2A0PJX2 215 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 KIAA0391O15091 583 aaKnown RBP16.42■□□□□ 0.22
TGFB1-201ENST00000221930 CALCAP01258 141 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 MYCLP12524 364 aaPredicted RBP16.42■□□□□ 0.22
TGFB1-201ENST00000221930 ADSSP30520 456 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 SOX10P56693 466 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 MYBPC2Q14324 1141 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 QPCTQ16769 361 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 NEK9Q8TD19 979 aa16.42■□□□□ 0.22
TGFB1-201ENST00000221930 PAIP2Q9BPZ3 127 aaKnown RBP16.42■□□□□ 0.22
TGFB1-201ENST00000221930 GMNCA6NCL1 334 aa16.41■□□□□ 0.22
TGFB1-201ENST00000221930 CCDC169A6NNP5 214 aa16.41■□□□□ 0.22
TGFB1-201ENST00000221930 ANKRD63C9JTQ0 380 aa16.41■□□□□ 0.22
TGFB1-201ENST00000221930 ZDHHC24Q6UX98 284 aa16.41■□□□□ 0.22
TGFB1-201ENST00000221930 NSMFQ6X4W1 530 aa16.41■□□□□ 0.22
TGFB1-201ENST00000221930 TAAR1Q96RJ0 339 aa16.41■□□□□ 0.22
TGFB1-201ENST00000221930 SH3GL3Q99963 347 aa16.41■□□□□ 0.22
TGFB1-201ENST00000221930 TOPORSQ9NS56 1045 aaPredicted RBP16.41■□□□□ 0.22
TGFB1-201ENST00000221930 NOCTQ9UK39 431 aaKnown RBP16.41■□□□□ 0.22
TGFB1-201ENST00000221930 TRPC6Q9Y210 931 aa16.41■□□□□ 0.22
TGFB1-201ENST00000221930 TRAPPC3O43617 180 aa16.41■□□□□ 0.22
TGFB1-201ENST00000221930 RTN2O75298 545 aa16.41■□□□□ 0.22
TGFB1-201ENST00000221930 RPL21P46778 160 aaKnown RBP16.41■□□□□ 0.22
TGFB1-201ENST00000221930 GTF2BQ00403 316 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms