RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 ZNF233A6NK53 670 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 P4HA2O15460 535 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 FESP07332 822 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 ACTN1P12814 892 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 GCLMP48507 274 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 NAALADL2Q58DX5 795 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 PPP4R3CPQ6ZMV5 832 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 RUFY4Q6ZNE9 571 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 CEP128Q6ZU80 1094 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 KIF2BQ8N4N8 673 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 DCLK2Q8N568 766 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 PAF1Q8N7H5 531 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 CEP63Q96MT8 703 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 SEZ6LQ9BYH1 1024 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 VCPKMTQ9H867 229 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 ANO9A1A5B4 782 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 YDJCA8MPS7 323 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 PCK1P35558 622 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 MXI1P50539 228 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 FUT2Q10981 343 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 SULF1Q8IWU6 871 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 ATP6V0A1Q93050 837 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 PPP1R14BQ96C90 147 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 MRRFQ96E11 262 aaKnown RBP11.29□□□□□ -0.6
VPS18-201ENST00000220509 ACCSQ96QU6 501 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 NUDT12Q9BQG2 462 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 C1orf112Q9NSG2 853 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 C6orf203Q9P0P8 240 aaPredicted RBP11.29□□□□□ -0.6
VPS18-201ENST00000220509 CEP72Q9P209 647 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 CNOT7Q9UIV1 285 aaKnown RBP11.29□□□□□ -0.6
VPS18-201ENST00000220509 MYO3BQ8WXR4 1341 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 DIAPH2O60879 1101 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 FAM107AO95990 144 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 CBX3Q13185 183 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 SIX5Q8N196 739 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 LRRC45Q96CN5 670 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 SEC16BQ96JE7 1060 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 RSPH9Q9H1X1 276 aaPredicted RBP11.29□□□□□ -0.6
VPS18-201ENST00000220509 RIOX1Q9H6W3 641 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 RGS17Q9UGC6 210 aaPredicted RBP11.29□□□□□ -0.6
VPS18-201ENST00000220509 SPO11Q9Y5K1 396 aa11.29□□□□□ -0.6
VPS18-201ENST00000220509 ATICP31939 592 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.6
VPS18-201ENST00000220509 MYBPC3Q14896 1274 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 ACCSLQ4AC99 568 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 TTI2Q6NXR4 508 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 LLGL2Q6P1M3 1020 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 DCUN1D2Q6PH85 259 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 CCDC197Q8NCU1 140 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 GABPB2Q8TAK5 448 aaPredicted RBP11.28□□□□□ -0.6
VPS18-201ENST00000220509 DTNBP1Q96EV8 351 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 SERPINA10Q9UK55 444 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 DNAJC12Q9UKB3 198 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.28□□□□□ -0.6
VPS18-201ENST00000220509 ITIH6Q6UXX5 1313 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 SLC16A4O15374 487 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 RAD51CO43502 376 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 MYBP10242 640 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 PBX1P40424 430 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
VPS18-201ENST00000220509 ARPC4P59998 168 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 LRRC14Q15048 493 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 CCDC38Q502W7 563 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 ZCCHC8Q6NZY4 707 aaKnown RBP11.28□□□□□ -0.6
VPS18-201ENST00000220509 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
VPS18-201ENST00000220509 TRPC6Q9Y210 931 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 WDR37Q9Y2I8 494 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.28□□□□□ -0.6
VPS18-201ENST00000220509 A0A1W2PRG0 241 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 HMGB1P1B2RPK0 211 aaPredicted RBP11.28□□□□□ -0.6
VPS18-201ENST00000220509 DAPK3O43293 454 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 ENTPD3O75355 529 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 B3GALNT1O75752 331 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
VPS18-201ENST00000220509 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
VPS18-201ENST00000220509 NT5DC1Q5TFE4 455 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 CATSPER3Q86XQ3 398 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 CASKIN2Q8WXE0 1202 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 ATP6V0A4Q9HBG4 840 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 RNF146Q9NTX7 359 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 TYW1Q9NV66 732 aaKnown RBP11.28□□□□□ -0.6
VPS18-201ENST00000220509 FEM1BQ9UK73 627 aa11.28□□□□□ -0.6
VPS18-201ENST00000220509 TMA7Q9Y2S6 64 aaKnown RBP11.28□□□□□ -0.6
VPS18-201ENST00000220509 GAKO14976 1311 aa11.27□□□□□ -0.6
VPS18-201ENST00000220509 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.6
VPS18-201ENST00000220509 FOSL1P15407 271 aa11.27□□□□□ -0.6
VPS18-201ENST00000220509 GMPSP49915 693 aaPredicted RBP11.27□□□□□ -0.6
VPS18-201ENST00000220509 QPCTQ16769 361 aa11.27□□□□□ -0.6
VPS18-201ENST00000220509 LMBRD2Q68DH5 695 aaPredicted RBP11.27□□□□□ -0.6
VPS18-201ENST00000220509 SNRNP48Q6IEG0 339 aaKnown RBP11.27□□□□□ -0.6
VPS18-201ENST00000220509 PACS1Q6VY07 963 aa11.27□□□□□ -0.6
VPS18-201ENST00000220509 FUKQ8N0W3 1084 aa11.27□□□□□ -0.6
VPS18-201ENST00000220509 CACTIN-AS1Q8N1I8 211 aa11.27□□□□□ -0.6
VPS18-201ENST00000220509 SLC7A3Q8WY07 619 aa11.27□□□□□ -0.6
VPS18-201ENST00000220509 MTMR8Q96EF0 704 aa11.27□□□□□ -0.6
VPS18-201ENST00000220509 NT5C1BQ96P26 610 aa11.27□□□□□ -0.6
VPS18-201ENST00000220509 AMACRQ9UHK6 382 aa11.27□□□□□ -0.6
VPS18-201ENST00000220509 IVNS1ABPQ9Y6Y0 642 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms