RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 WNT7AO00755 349 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 CASQ2O14958 399 aaPredicted RBP10.08□□□□□ -0.8
CCDC113-201ENST00000219299 RNF40O75150 1001 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 ZNF131P52739 623 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 WDR72Q3MJ13 1102 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 CCDC60Q8IWA6 550 aaPredicted RBP10.08□□□□□ -0.8
CCDC113-201ENST00000219299 REPS2Q8NFH8 660 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 RAB3IL1Q8TBN0 382 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 PNMA5Q96PV4 448 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 C17orf75Q9HAS0 396 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 SPTLC3Q9NUV7 552 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 DDX41Q9UJV9 622 aaKnown RBP10.08□□□□□ -0.8
CCDC113-201ENST00000219299 MYO1FO00160 1098 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 GAS2O43903 313 aaKnown RBP10.08□□□□□ -0.8
CCDC113-201ENST00000219299 ARID5BQ14865 1188 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 KCNK18Q7Z418 384 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 CEP120Q8N960 986 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 FBXL13Q8NEE6 735 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 TRIM58Q8NG06 486 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 MIS12Q9H081 205 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 LRRC4Q9HBW1 653 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 PDGFCQ9NRA1 345 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 ZNF214Q9UL59 606 aaPredicted RBP10.08□□□□□ -0.8
CCDC113-201ENST00000219299 UBIAD1Q9Y5Z9 338 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 FKTNO75072 461 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 RNF8O76064 485 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 PPP2R5CQ13362 524 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 SRGAP1Q7Z6B7 1085 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 TBC1D31Q96DN5 1066 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 OSMRQ99650 979 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 SENP7Q9BQF6 1050 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 BPIFA3Q9BQP9 254 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.08□□□□□ -0.8
CCDC113-201ENST00000219299 PLIN4Q96Q06 1357 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 DCDC2CA8MYV0 355 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 ELNP15502 786 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 CCT5P48643 541 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 TERF2Q15554 542 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 CFAP157Q5JU67 520 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 SIAH1Q8IUQ4 282 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 DHX40Q8IX18 779 aaKnown RBP10.08□□□□□ -0.8
CCDC113-201ENST00000219299 KLHL7Q8IXQ5 586 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 SHCBP1Q8NEM2 672 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 ZNF653Q96CK0 615 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 PPP1R13BQ96KQ4 1090 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 C12orf42Q96LP6 360 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 DDX23Q9BUQ8 820 aaKnown RBP10.08□□□□□ -0.8
CCDC113-201ENST00000219299 HAUS4Q9H6D7 363 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 FAM204AQ9H8W3 233 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 TBX20Q9UMR3 447 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 A0A087WZ62 844 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 MUTP22033 750 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 MAP7Q14244 749 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 MESDQ14696 234 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 ZNF365Q70YC5 407 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 URGCPQ8TCY9 931 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 GDAP1L1Q96MZ0 367 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 FDXACB1Q9BRP7 624 aaPredicted RBP10.07□□□□□ -0.8
CCDC113-201ENST00000219299 RBPJLQ9UBG7 517 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 CDC23Q9UJX2 597 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 AMFRQ9UKV5 643 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 PSMD10O75832 226 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 PRKAR2AP13861 404 aaKnown RBP10.07□□□□□ -0.8
CCDC113-201ENST00000219299 ELF1P32519 619 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 LONRF2Q1L5Z9 754 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 EDRF1Q3B7T1 1238 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 FRMD5Q7Z6J6 570 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 SYCE1Q8N0S2 351 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 VPS52Q8N1B4 723 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 GABPB2Q8TAK5 448 aaPredicted RBP10.07□□□□□ -0.8
CCDC113-201ENST00000219299 L3MBTL3Q96JM7 780 aaPredicted RBP10.07□□□□□ -0.8
CCDC113-201ENST00000219299 KCNMB3Q9NPA1 279 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 AGAP1Q9UPQ3 857 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 IQCB1Q15051 598 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 APBA2Q99767 749 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 A0A087X0B3 334 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 SOWAHDA6NJG2 315 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 LGALS2P05162 132 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 HSD17B4P51659 736 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 MYO9BQ13459 2157 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 LLGL1Q15334 1064 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 GRIK4Q16099 956 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 PHLDB3Q6NSJ2 640 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 ALKBH5Q6P6C2 394 aaKnown RBP10.07□□□□□ -0.8
CCDC113-201ENST00000219299 TACO1Q9BSH4 297 aaKnown RBP10.07□□□□□ -0.8
CCDC113-201ENST00000219299 FAM114A2Q9NRY5 505 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 HYOU1Q9Y4L1 999 aa10.07□□□□□ -0.8
CCDC113-201ENST00000219299 PQBP1O60828 265 aaKnown RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 CTNNA1P35221 906 aaKnown RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 TPD52P55327 224 aaPredicted RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 MUM1Q2TAK8 710 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 CELF3Q5SZQ8 465 aaKnown RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 DNAJB3Q8WWF6 145 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 LBHD1Q9BQE6 289 aaPredicted RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 MTG1Q9BT17 334 aaPredicted RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 RAB17Q9H0T7 212 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 AGPAT3Q9NRZ7 376 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 COL20A1Q9P218 1284 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 USP20Q9Y2K6 914 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 USH1CQ9Y6N9 552 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms