RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Atp5c1Q91VR2 298 aaKnown RBP20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 YwhabQ9CQV8 246 aaKnown RBP20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 NkapQ9D0F4 415 aaKnown RBP20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Tmem174Q9DCX7 243 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Nfs1Q9Z1J3 459 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Cacna1fQ9JIS7 1985 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 PatjQ63ZW7 1834 aa20.1■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Oip5A2AQ14 241 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Wdr41Q3UDP0 460 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Zcchc8Q9CYA6 709 aaKnown RBP20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Krt17Q9QWL7 433 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 6030498E09RikB1AX85 169 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 LipeP54310 759 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Frg1P97376 258 aaKnown RBP20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 SpertQ32MG2 446 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Bank1Q80VH0 783 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 TbckQ8BM85 762 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Ccdc65Q8VHI7 493 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Sppl3Q9CUS9 384 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Rbm31yQ9D3U4 565 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Gtf3c6Q9D8P7 227 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Gtf2h1Q9DBA9 547 aa20.09■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Akr1b8P45377 316 aa20.08■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Btbd9Q8C726 612 aa20.08■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Lman1Q9D0F3 517 aa20.08■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 Txnrd2Q9JLT4 524 aa20.08■□□□□ 0.81
Shkbp1-201ENSMUST00000003857 IvlP48997 467 aa20.08■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 GabpaQ00422 454 aa20.08■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Bpifb5Q3UQ05 490 aa20.08■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Sp4Q62445 782 aa20.08■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Enoph1Q8BGB7 257 aa20.08■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Q8BGN9 141 aa20.08■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Nr3c2Q8VII8 978 aa20.08■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gys1Q9Z1E4 738 aaKnown RBP20.08■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Mdm4O35618 489 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Slc9c1Q6UJY2 1175 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Ntrk3Q6VNS1 825 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Uts2bQ765I1 113 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Aldh5a1Q8BWF0 523 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Camkk2Q8C078 588 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Tmem120aQ8C1E7 343 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Tmem161bQ8C2L6 487 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Champ1Q8K327 802 aaKnown RBP20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Defb15Q8R2I5 79 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Atp6v1e2Q9D593 226 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 IkbipQ9DBZ1 373 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Capn12Q9ER56 720 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Cntn6Q9JMB8 1028 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Prss51A0A286YDY8 319 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Apba1B2RUJ5 842 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Olfr552E9Q545 317 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Rnf216P58283 853 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Abi2P62484 446 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Hook3Q8BUK6 718 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Npm3Q9CPP0 175 aaKnown RBP20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 GrapQ9CX99 217 aa20.07■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Ttll6A4Q9E8 822 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Krt8P11679 490 aaKnown RBP20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Tmem39bQ810L4 492 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Klhl11Q8CE33 709 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Tti1Q91V83 1085 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 CalcbQ99MP3 130 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Mcur1Q9CXD6 340 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Cnot8Q9D8X5 292 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Mipol1Q9D9F8 279 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Klrc2Q9WTJ9 238 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Fem1bQ9Z2G0 627 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Pds5aQ6A026 1332 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Pitpnm1O35954 1243 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Alkbh1P0CB42 389 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Stmn4P63042 189 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 ZufspQ3T9Z9 577 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Palb2Q3U0P1 1104 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Oog4Q4G0C7 502 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Fbxl5Q8C2S5 690 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Fkbp6Q91XW8 327 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Nudt12Q9DCN1 462 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Cnga3Q9JJZ8 631 aa20.06■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Prdm15E9Q8T2 1174 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 TazI7HJS2 263 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Erich4Q3UNU4 136 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Abl2Q4JIM5 1182 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Znf697Q569E7 569 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Sema5aQ62217 1077 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gpd2Q64521 727 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Daam2Q80U19 1115 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Tbc1d22bQ80VE5 505 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Dusp4Q8BFV3 398 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Pkn2Q8BWW9 983 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Actl9Q8CG27 415 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 ItpkaQ8R071 459 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Dgcr8Q9EQM6 773 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 JmyQ9QXM1 983 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Mettl1Q9Z120 268 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Megf6Q80V70 1572 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gm5814J3QP80 125 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Ifnb1P01575 182 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Pdlim7Q3TJD7 457 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Stxbp2Q64324 593 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Dnajc8Q6NZB0 253 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms