RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 NFIL3Q16649 462 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 PLEKHG4Q58EX7 1191 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 ANKRD40Q6AI12 368 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 NOTUMQ6P988 496 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 HS2ST1Q7LGA3 356 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 C12orf56Q8IXR9 622 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 C7orf61Q8IZ16 206 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 RPUSD2Q8IZ73 545 aaKnown RBP13.49□□□□□ -0.25
LINC00339-213ENST00000642137 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 CCDC51Q96ER9 411 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 SCLYQ96I15 445 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 TSG101Q99816 390 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 FTHL17Q9BXU8 183 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
LINC00339-213ENST00000642137 AGPAT5Q9NUQ2 364 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 RWDD2AQ9UIY3 292 aa13.49□□□□□ -0.25
LINC00339-213ENST00000642137 HNRNPDLO14979 420 aaKnown RBP13.48□□□□□ -0.25
LINC00339-213ENST00000642137 KIAA0391O15091 583 aaKnown RBP13.48□□□□□ -0.25
LINC00339-213ENST00000642137 CLDN3O15551 220 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 B4GALT5O43286 388 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 LRRC63Q05C16 580 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 DSC3Q14574 896 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 TMEM132AQ24JP5 1023 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 EDRF1Q3B7T1 1238 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 ANO6Q4KMQ2 910 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 ZCWPW2Q504Y3 356 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 KLHL10Q6JEL2 608 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 SLC39A4Q6P5W5 647 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 APBB1IPQ7Z5R6 666 aaPredicted RBP13.48□□□□□ -0.25
LINC00339-213ENST00000642137 SLC9A9Q8IVB4 645 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 DBF4BQ8NFT6 615 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 ENOX1Q8TC92 643 aaKnown RBP13.48□□□□□ -0.25
LINC00339-213ENST00000642137 SEPT8Q92599 483 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 CPB2Q96IY4 423 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 ZBTB45Q96K62 511 aaPredicted RBP13.48□□□□□ -0.25
LINC00339-213ENST00000642137 BPIFA3Q9BQP9 254 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 ADPGKQ9BRR6 497 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 IFIH1Q9BYX4 1025 aaKnown RBP13.48□□□□□ -0.25
LINC00339-213ENST00000642137 DNAJC25Q9H1X3 360 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 TMX1Q9H3N1 280 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 DMAC2Q9NW81 257 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 USP20Q9Y2K6 914 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 BRCA2P51587 3418 aa13.48□□□□□ -0.25
LINC00339-213ENST00000642137 SCN5AQ14524 2016 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 ZMYM2Q9UBW7 1377 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 TANC1Q9C0D5 1861 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 ABLIM1O14639 778 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 CLIC2O15247 247 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 LDHAP00338 332 aaKnown RBP13.47□□□□□ -0.25
LINC00339-213ENST00000642137 PFKMP08237 780 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 RPL13P26373 211 aaKnown RBP13.47□□□□□ -0.25
LINC00339-213ENST00000642137 ADSSP30520 456 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 RGS19P49795 217 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 PMS1P54277 932 aaKnown RBP13.47□□□□□ -0.25
LINC00339-213ENST00000642137 MCL1Q07820 350 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 TTI2Q6NXR4 508 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 SLC27A1Q6PCB7 646 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 MPZL3Q6UWV2 235 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 C11orf57Q6ZUT1 292 aaPredicted RBP13.47□□□□□ -0.25
LINC00339-213ENST00000642137 TCHPQ9BT92 498 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 TRAIPQ9BWF2 469 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 IKZF4Q9H2S9 585 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 TSPY26PQ9H489 355 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 PDZD7Q9H5P4 517 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 AGPAT3Q9NRZ7 376 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 CTNND2Q9UQB3 1225 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 PIN4Q9Y237 131 aaKnown RBP13.47□□□□□ -0.25
LINC00339-213ENST00000642137 NR2E3Q9Y5X4 410 aa13.47□□□□□ -0.25
LINC00339-213ENST00000642137 A0A0B4J269 797 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 TRIM49BA6NDI0 452 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 MCF2P10911 925 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 CSF2RAP15509 400 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 ZNF165P49910 485 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 STX17P56962 302 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 FKBP3Q00688 224 aaKnown RBP13.46□□□□□ -0.25
LINC00339-213ENST00000642137 PPIGQ13427 754 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC00339-213ENST00000642137 ADAM9Q13443 819 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 KYAT1Q16773 422 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 DCAF4L1Q3SXM0 396 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 EEF1DP3Q658K8 133 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 ARMCX5Q6P1M9 558 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 CNKSR3Q6P9H4 555 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 DEFB128Q7Z7B8 93 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 RTN4RL1Q86UN2 441 aaPredicted RBP13.46□□□□□ -0.25
LINC00339-213ENST00000642137 ZC3H3Q8IXZ2 948 aaKnown RBP13.46□□□□□ -0.25
LINC00339-213ENST00000642137 POMGNT1Q8WZA1 660 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 BADQ92934 168 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 VWCEQ96DN2 955 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 MED15Q96RN5 788 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 DUSP9Q99956 384 aaKnown RBP13.46□□□□□ -0.25
LINC00339-213ENST00000642137 HAPLN2Q9GZV7 340 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 IL23AQ9NPF7 189 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 RGS18Q9NS28 235 aa13.46□□□□□ -0.25
LINC00339-213ENST00000642137 TET1Q8NFU7 2136 aa13.46□□□□□ -0.26
LINC00339-213ENST00000642137 SMTNL1A8MU46 457 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 TISP43B9A030 160 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 ENPP3O14638 875 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 CETN3O15182 167 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 OGTO15294 1046 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 MGEA5O60502 916 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms