RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 TOM1L1O75674 476 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 LDHAP00338 332 aaKnown RBP14.17□□□□□ -0.14
PHGDH-218ENST00000641491 TIMP1P01033 207 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 CHRNA1P02708 482 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 PFKMP08237 780 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 SKIP12755 728 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 CCNE1P24864 410 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 ERCC5P28715 1186 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-218ENST00000641491 CD52P31358 61 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 CYP2C18P33260 490 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 CASP5P51878 434 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 EHHADHQ08426 723 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 MGAT3Q09327 533 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 PPIGQ13427 754 aaKnown RBP eCLIP14.17□□□□□ -0.146e-8■□□□□ 10.1
PHGDH-218ENST00000641491 NOLC1Q14978 699 aaKnown RBP eCLIP14.17□□□□□ -0.14
PHGDH-218ENST00000641491 FAM187BQ17R55 369 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 BMT2Q1RMZ1 405 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 TRIM71Q2Q1W2 868 aaKnown RBP14.17□□□□□ -0.14
PHGDH-218ENST00000641491 LRIT3Q3SXY7 679 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 FBXO47Q5MNV8 452 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 DEFB128Q7Z7B8 93 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 CREBRFQ8IUR6 639 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 ZNF507Q8TCN5 953 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 WNT8BQ93098 351 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 MSTO1Q9BUK6 570 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 CHST12Q9NRB3 414 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 RWDD2AQ9UIY3 292 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 TBX21Q9UL17 535 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 ST3GAL5Q9UNP4 418 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 NOC2LQ9Y3T9 749 aaKnown RBP14.17□□□□□ -0.14
PHGDH-218ENST00000641491 ADGRA3Q8IWK6 1321 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 KIAA0355O15063 1070 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 TSPAN1O60635 241 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 EXOC3O60645 756 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 IQCF3P0C7M6 154 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 EPB41P11171 864 aaKnown RBP14.16□□□□□ -0.14
PHGDH-218ENST00000641491 FGFR4P22455 802 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 ZNF165P49910 485 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 RAB27AP51159 221 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 CYP2J2P51589 502 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 YARSP54577 528 aaKnown RBP14.16□□□□□ -0.14
PHGDH-218ENST00000641491 STX17P56962 302 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 CCDC40Q4G0X9 1142 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 SLC27A1Q6PCB7 646 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 MPZL3Q6UWV2 235 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 EPM2AIP1Q7L775 607 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-218ENST00000641491 ZBTB33Q86T24 672 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 FAM228AQ86W67 206 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 CSGALNACT2Q8N6G5 542 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 SCLYQ96I15 445 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 CPB2Q96IY4 423 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 CCDC94Q9BW85 323 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-218ENST00000641491 TARS2Q9BW92 718 aaKnown RBP14.16□□□□□ -0.14
PHGDH-218ENST00000641491 CCDC113Q9H0I3 377 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 MTIF3Q9H2K0 278 aaKnown RBP14.16□□□□□ -0.14
PHGDH-218ENST00000641491 FZD8Q9H461 694 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 AGPAT5Q9NUQ2 364 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 MTMR10Q9NXD2 777 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 PADI3Q9ULW8 664 aa14.16□□□□□ -0.14
PHGDH-218ENST00000641491 EFCAB14O75071 495 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 CLSTN1O94985 981 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 NR3C1P04150 777 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 KRT13P13646 458 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 CDK11BP21127 795 aaKnown RBP14.15□□□□□ -0.14
PHGDH-218ENST00000641491 GARTP22102 1010 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 NR2F2P24468 414 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 ZNF445P59923 1031 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 FKBP3Q00688 224 aaKnown RBP14.15□□□□□ -0.14
PHGDH-218ENST00000641491 MYL5Q02045 173 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 FPGSQ05932 587 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 LPIN1Q14693 890 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 CEP135Q66GS9 1140 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 MFSD5Q6N075 450 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 PGBD4Q96DM1 585 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 CTAGE1Q96RT6 745 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 FIZ1Q96SL8 496 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 ACO2Q99798 780 aaKnown RBP14.15□□□□□ -0.14
PHGDH-218ENST00000641491 FGFBP2Q9BYJ0 223 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 CDHR5Q9HBB8 845 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 KIAA1586Q9HCI6 787 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 AGPAT3Q9NRZ7 376 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 AGO2Q9UKV8 859 aaKnown RBP14.15□□□□□ -0.14
PHGDH-218ENST00000641491 LRFN2Q9ULH4 789 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 TNFSF13BQ9Y275 285 aa14.15□□□□□ -0.14
PHGDH-218ENST00000641491 R3HCC1Q9Y3T6 440 aaKnown RBP14.15□□□□□ -0.14
PHGDH-218ENST00000641491 CLIC2O15247 247 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 PPP1R37O75864 691 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 NPTXRO95502 500 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 GNA14O95837 355 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 MCF2P10911 925 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 ARF4P18085 180 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-218ENST00000641491 KCNJ6P48051 423 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 ADAM9Q13443 819 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 IKBKEQ14164 716 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 EDRF1Q3B7T1 1238 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 Q7L0L9 218 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 AOPEPQ8N6M6 819 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 XXYLT1Q8NBI6 393 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 RNF169Q8NCN4 708 aa14.14□□□□□ -0.15
PHGDH-218ENST00000641491 GLIS3Q8NEA6 775 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms