RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 NME3Q13232 169 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 TFDP2Q14188 446 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 PSMD6Q15008 389 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 SV2CQ496J9 727 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 NOTUMQ6P988 496 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 OOSP2Q86WS3 158 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 DDX42Q86XP3 938 aaKnown RBP eCLIP9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 RNF217Q8TC41 542 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 TMEM169Q96HH4 297 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 MXRA8Q9BRK3 442 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 IFT172Q9UG01 1749 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 FKTNO75072 461 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 RNF40O75150 1001 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 GPC4O75487 556 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 TCP11X2Q5H9J9 407 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 MGARPQ8TDB4 240 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 ZBTB9Q96C00 473 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 AGBL1Q96MI9 1066 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 SPON2Q9BUD6 331 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 MAGEB5Q9BZ81 275 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 BAG5Q9UL15 447 aa9.96□□□□□ -0.81
CACNA1D-230ENST00000640483 PDHBP11177 359 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 ATN1P54259 1190 aaPredicted RBP9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 TAF11Q15544 211 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 DCLK2Q8N568 766 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 SOCS4Q8WXH5 440 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 ALKBH8Q96BT7 664 aaKnown RBP9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 A0A087WWV3 80 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 CXCL11O14625 94 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 TJP3O95049 919 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 IL18RAPO95256 599 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 LARGE1O95461 756 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 CUL4AQ13619 759 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 STILQ15468 1287 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 CYP4A22Q5TCH4 519 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 KLC3Q6P597 504 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 CLEC10AQ8IUN9 316 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 C10orf67Q8IYJ2 551 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 SRBD1Q8N5C6 995 aaKnown RBP9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 CSGALNACT1Q8TDX6 532 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 RBM41Q96IZ5 413 aaKnown RBP9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 VCXQ9H320 206 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 PRMT7Q9NVM4 692 aaPredicted RBP9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 H7C4K7 107 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 PAPOLAP51003 745 aaKnown RBP9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 PPP4CP60510 307 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 PDIA5Q14554 519 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 PHKG1Q16816 387 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 PREPLQ4J6C6 727 aaPredicted RBP9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 NAALADL2Q58DX5 795 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 PASD1Q8IV76 773 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 CCDC170Q8IYT3 715 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 RDM1Q8NG50 284 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 GLIS2Q9BZE0 524 aaPredicted RBP9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 AGAP1Q9UPQ3 857 aa9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.96□□□□□ -0.82
CACNA1D-230ENST00000640483 CCDC160A6NGH7 325 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 ZNF189O75820 626 aaPredicted RBP9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 TCF7P36402 384 aaPredicted RBP9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 DPCR1Q3MIW9 517 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 CES5AQ6NT32 575 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 VPS39Q96JC1 886 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 PBKQ96KB5 322 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 KLC2Q9H0B6 622 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 TRIM45Q9H8W5 580 aaPredicted RBP9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 KCND2Q9NZV8 630 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 EFCAB8A8MWE9 144 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 RWDD2BP57060 319 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 STX1BP61266 288 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 PSMC1P62191 440 aaKnown RBP9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 NBPF9Q3BBW0 867 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 DCAF4L1Q3SXM0 396 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 ZNF512Q96ME7 567 aaPredicted RBP9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 ZNF212Q9UDV6 495 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 PGRMC1O00264 195 aaKnown RBP9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 EIF4A3P38919 411 aaKnown RBP9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 FRA10AC1Q70Z53 315 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 NUF2Q9BZD4 464 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 INTS2Q9H0H0 1204 aaKnown RBP9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 H3BRJ5 948 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 AMHP03971 560 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 INHBEP58166 350 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 ATP11AP98196 1134 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 MGAT5BQ3V5L5 792 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 NBPF12Q5TAG4 269 aaPredicted RBP9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 SAMD3Q8N6K7 520 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 TTC13Q8NBP0 860 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 DEPDC1BQ8WUY9 529 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 RIT2Q99578 217 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 THG1LQ9NWX6 298 aaKnown RBP9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 CEP72Q9P209 647 aa9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 CNOT8Q9UFF9 292 aaKnown RBP9.95□□□□□ -0.82
CACNA1D-230ENST00000640483 RNASEH1O60930 286 aaKnown RBP9.94□□□□□ -0.82
CACNA1D-230ENST00000640483 MYBL1P10243 752 aa9.94□□□□□ -0.82
CACNA1D-230ENST00000640483 LCP1P13796 627 aa9.94□□□□□ -0.82
CACNA1D-230ENST00000640483 PCSK1P29120 753 aa9.94□□□□□ -0.82
CACNA1D-230ENST00000640483 MSH2P43246 934 aa9.94□□□□□ -0.82
CACNA1D-230ENST00000640483 TRIM72Q6ZMU5 477 aa9.94□□□□□ -0.82
CACNA1D-230ENST00000640483 NHEJ1Q9H9Q4 299 aaPredicted RBP9.94□□□□□ -0.82
CACNA1D-230ENST00000640483 POC1B-GALNT4F8VUJ3 575 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms