RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 PLEKHO2Q8TD55 490 aa17.82■□□□□ 0.44
HNRNPU-228ENST00000640306 ELAC2Q9BQ52 826 aaKnown RBP17.82■□□□□ 0.44
HNRNPU-228ENST00000640306 ZSWIM1Q9BR11 485 aa17.82■□□□□ 0.44
HNRNPU-228ENST00000640306 CD2APQ9Y5K6 639 aa17.82■□□□□ 0.44
HNRNPU-228ENST00000640306 LOC102724159A0A0B4J2E5 919 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 IPO5O00410 1097 aaKnown RBP17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 VAMP7P51809 220 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 EIF3BP55884 814 aaKnown RBP17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 PPP2R5CQ13362 524 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 KIF22Q14807 665 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 PWP2Q15269 919 aaKnown RBP17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 E2F5Q15329 346 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 TRIP13Q15645 432 aaPredicted RBP17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 SWT1Q5T5J6 900 aaKnown RBP17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 PADI6Q6TGC4 694 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 NOP9Q86U38 636 aaKnown RBP17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 SLC5A5Q92911 643 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 PRMT6Q96LA8 375 aaPredicted RBP17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 FAM129AQ9BZQ8 928 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 ADAM7Q9H2U9 754 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 GPRC5CQ9NQ84 441 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 HGSO14964 777 aaPredicted RBP17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 ACSL3O95573 720 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 GPC5P78333 572 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 PPP2R5AQ15172 486 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 CYB5D1Q6P9G0 228 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 RHOT2Q8IXI1 618 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 C1orf54Q8WWF1 131 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 ZKSCAN4Q969J2 545 aaPredicted RBP17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 INTS9Q9NV88 658 aaKnown RBP17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 STK32BQ9NY57 414 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 STK24Q9Y6E0 443 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 ANKRD31Q8N7Z5 1873 aa17.81■□□□□ 0.44
HNRNPU-228ENST00000640306 ECE2O60344 883 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 PAEPP09466 180 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 DLATP10515 647 aaKnown RBP17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 ZNF131P52739 623 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 ADCY1Q08828 1119 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 DHX34Q14147 1143 aaKnown RBP17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 SEL1L2Q5TEA6 688 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 FUKQ8N0W3 1084 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 DDX23Q9BUQ8 820 aaKnown RBP17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 IDI2Q9BXS1 227 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 GREB1LQ9C091 1923 aaPredicted RBP17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 FAM187AA6NFU0 413 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 LONRF1Q17RB8 773 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 GRIPAP1Q4V328 841 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 EPC2Q52LR7 807 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 C2CD6Q53TS8 623 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 FAM133BQ5BKY9 247 aaKnown RBP17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 DACT2Q5SW24 774 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.8■□□□□ 0.445e-9■■□□□ 11.7
HNRNPU-228ENST00000640306 TRPC6Q9Y210 931 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 SYNGAP1Q96PV0 1343 aa17.8■□□□□ 0.44
HNRNPU-228ENST00000640306 KIF13BQ9NQT8 1826 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 C5orf60A6NFR6 353 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 CCDC169A6NNP5 214 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 CREB1P16220 341 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 RDXP35241 583 aaKnown RBP17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 VPS41P49754 854 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 CCDC91Q7Z6B0 441 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 SAAL1Q96ER3 474 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 NUP85Q9BW27 656 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 MYH11P35749 1972 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 SRRM3A6NNA2 597 aaPredicted RBP17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 CLDN3O15551 220 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 RARAP10276 462 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 NPR1P16066 1061 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 DAB2IPQ5VWQ8 1189 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 PODNQ7Z5L7 613 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 CCDC197Q8NCU1 140 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 ATXN2LQ8WWM7 1075 aaKnown RBP17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 KIFC3Q9BVG8 833 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 TEKT3Q9BXF9 490 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 CNOT10Q9H9A5 744 aaKnown RBP17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 SEL1LQ9UBV2 794 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 GGA2Q9UJY4 613 aa17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 DIS3Q9Y2L1 958 aaKnown RBP17.79■□□□□ 0.44
HNRNPU-228ENST00000640306 PIK3CDO00329 1044 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 NUDT17P0C025 328 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 CHRNA3P32297 505 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 PDE6BP35913 854 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 PPP1R7Q15435 360 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 C10orf71Q711Q0 1435 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 CDAN1Q8IWY9 1227 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 PARP9Q8IXQ6 854 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 ATG4AQ8WYN0 398 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 CCT6BQ92526 530 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 DHX38Q92620 1227 aaKnown RBP17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 ZNF653Q96CK0 615 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 ZNF317Q96PQ6 595 aaPredicted RBP17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 FAM118BQ9BPY3 351 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 ACTR5Q9H9F9 607 aaPredicted RBP17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 MTRF1LQ9UGC7 380 aaKnown RBP17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 SCAF8Q9UPN6 1271 aaKnown RBP17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 SIPA1L1O43166 1804 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 SLC16A4O15374 487 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 CHRNB2P17787 502 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 MAP2K2P36507 400 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 CETN1Q12798 172 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms