RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 TRIM64CA6NLI5 447 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 F8VZ95 297 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 WDR46O15213 610 aaKnown RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 CHN1P15882 459 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 FUT4P22083 530 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PPP4CP60510 307 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PABPC4Q13310 644 aaKnown RBP eCLIP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 CUL1Q13616 776 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 KRT72Q14CN4 511 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 SLC10A5Q5PT55 438 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 C6orf183Q5T699 404 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PTF1AQ7RTS3 328 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 ARHGAP24Q8N264 748 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 DCAF4Q8WV16 495 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 SPIRE2Q8WWL2 714 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 CEP95Q96GE4 821 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 MAML3Q96JK9 1138 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 TMED5Q9Y3A6 229 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 SSU72P8A0A1W2PR75 194 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 TMEM247A6NEH6 219 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 A8MUI8 341 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 USP17L5A8MUK1 530 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 NDC80O14777 642 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 MCF2LO15068 1137 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 PPIP5K2O43314 1243 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 MYCLP1P12525 358 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 DCTN2Q13561 401 aaKnown RBP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ZNF268Q14587 947 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ITIH4Q14624 930 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 NAALADL2Q58DX5 795 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ANKRD40Q6AI12 368 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 TMEM53Q6P2H8 277 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 LRRC8BQ6P9F7 803 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 GSTA5Q7RTV2 222 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 KSR1Q8IVT5 923 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 MMGT1Q8N4V1 131 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ZNF280CQ8ND82 737 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 STK32AQ8WU08 396 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 FAM20AQ96MK3 541 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 NACC1Q96RE7 527 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 FNBP1Q96RU3 617 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 CHP1Q99653 195 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 CENPOQ9BU64 300 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ANO3Q9BYT9 981 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ZMYND12Q9H0C1 365 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 SYNCQ9H7C4 482 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 RNPEPL1Q9HAU8 725 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 SMARCAL1Q9NZC9 954 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 IKBKGQ9Y6K9 419 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 TOPAZ1Q8N9V7 1692 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 GRID2IPA4D2P6 1211 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 SRRM3A6NNA2 597 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 PP2D1A8MPX8 630 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 PPEF1O14829 653 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ATP5HO75947 161 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 STAMBPO95630 424 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 GAS8O95995 478 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 APOEP02649 317 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 SLCO1A2P46721 670 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 USP11P51784 963 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 TMEM259Q4ZIN3 620 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 FAM186BQ8IYM0 893 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ERGIC2Q96RQ1 377 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 TEKT3Q9BXF9 490 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 DIS3Q9Y2L1 958 aaKnown RBP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ARHGAP10A1A4S6 786 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ZNF233A6NK53 670 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 LRRC53A6NM62 1247 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 KRT16P08779 473 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 BMP3P12645 472 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ANXA13P27216 316 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 HOXD12P35452 270 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 EIF2B2P49770 351 aaKnown RBP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 SERPINB8P50452 374 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 SCNN1DP51172 638 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 PSMC1P62191 440 aaKnown RBP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ARHGAP44Q17R89 818 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 FIGNQ5HY92 759 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 FAM83BQ5T0W9 1011 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 NFRKBQ6P4R8 1299 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 INTS5Q6P9B9 1019 aaKnown RBP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 C6orf89Q6UWU4 347 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 KRT27Q7Z3Y8 459 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 CCDC105Q8IYK2 499 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 SLC44A5Q8NCS7 719 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 L3MBTL3Q96JM7 780 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 PRMT1Q99873 361 aaKnown RBP6.05□□□□□ -1.44
SCARB2-218ENST00000639715 TMBIM4Q9HC24 238 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 TUBGCP4Q9UGJ1 667 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 CROTQ9UKG9 612 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 TFR2Q9UP52 801 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 TMEM98Q9Y2Y6 226 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 GMEB1Q9Y692 573 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 ABCB11O95342 1321 aa6.05□□□□□ -1.44
SCARB2-218ENST00000639715 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.04□□□□□ -1.44
SCARB2-218ENST00000639715 KRT5P13647 590 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 CYP2J2P51589 502 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 COASYQ13057 564 aa6.04□□□□□ -1.44
SCARB2-218ENST00000639715 PKN1Q16512 942 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms