RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 BMPR1AP36894 532 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 ZEB1P37275 1124 aaPredicted RBP5.19□□□□□ -1.58
CCDC7-211ENST00000638889 USP14P54578 494 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 PHC1P78364 1004 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 BMS1Q14692 1282 aaKnown RBP5.19□□□□□ -1.58
CCDC7-211ENST00000638889 STRIP1Q5VSL9 837 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 DRICH1Q6PGQ1 229 aaPredicted RBP5.19□□□□□ -1.58
CCDC7-211ENST00000638889 OLFML1Q6UWY5 402 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 Q6YL49 198 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 BEND2Q8NDZ0 799 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 DNAJC2Q99543 621 aaKnown RBP5.19□□□□□ -1.58
CCDC7-211ENST00000638889 WNT8AQ9H1J5 351 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 SERHL2Q9H4I8 314 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 MSRAQ9UJ68 235 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 USP18Q9UMW8 372 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 CHST2Q9Y4C5 530 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 NUMBLQ9Y6R0 609 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 TGM5O43548 720 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 AVPR1BP47901 424 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 NEK4P51957 841 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 OCRLQ01968 901 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 TCEA2Q15560 299 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 ZBTB41Q5SVQ8 909 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 SYCE2Q6PIF2 218 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 LMBR1LQ6UX01 489 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 GLB1L2Q8IW92 636 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 ZNF610Q8N9Z0 462 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 SUPT20HQ8NEM7 779 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 CHTF18Q8WVB6 975 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 FDXACB1Q9BRP7 624 aaPredicted RBP5.18□□□□□ -1.58
CCDC7-211ENST00000638889 SYNPO2LQ9H987 977 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 AKIP1Q9NQ31 210 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 TRPM5Q9NZQ8 1165 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 DKK2Q9UBU2 259 aa5.18□□□□□ -1.58
CCDC7-211ENST00000638889 LSP1P33241 339 aa5.17□□□□□ -1.58
CCDC7-211ENST00000638889 KPNA1P52294 538 aaPredicted RBP5.17□□□□□ -1.58
CCDC7-211ENST00000638889 FAM189BP81408 668 aa5.17□□□□□ -1.58
CCDC7-211ENST00000638889 MRPS21P82921 87 aaKnown RBP5.17□□□□□ -1.58
CCDC7-211ENST00000638889 ADGRG3Q86Y34 549 aa5.17□□□□□ -1.58
CCDC7-211ENST00000638889 PLXDC1Q8IUK5 500 aa5.17□□□□□ -1.58
CCDC7-211ENST00000638889 NXPE1Q8N323 547 aa5.17□□□□□ -1.58
CCDC7-211ENST00000638889 LCORLQ8N3X6 602 aa5.17□□□□□ -1.58
CCDC7-211ENST00000638889 MSL3Q8N5Y2 521 aaKnown RBP5.17□□□□□ -1.58
CCDC7-211ENST00000638889 COQ10AQ96MF6 247 aa5.17□□□□□ -1.58
CCDC7-211ENST00000638889 BBC3Q96PG8 261 aaPredicted RBP5.17□□□□□ -1.58
CCDC7-211ENST00000638889 MTFR1LQ9H019 292 aa5.17□□□□□ -1.58
CCDC7-211ENST00000638889 KANSL2Q9H9L4 492 aa5.17□□□□□ -1.58
CCDC7-211ENST00000638889 THG1LQ9NWX6 298 aaKnown RBP5.17□□□□□ -1.58
CCDC7-211ENST00000638889 SYBUQ9NX95 663 aa5.17□□□□□ -1.58
CCDC7-211ENST00000638889 ZNF891A8MT65 544 aaPredicted RBP5.16□□□□□ -1.58
CCDC7-211ENST00000638889 B5MCH6 92 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 KPNA6O60684 536 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 LPXNO60711 386 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 LTA4HP09960 611 aaKnown RBP5.16□□□□□ -1.58
CCDC7-211ENST00000638889 ZSCAN20P17040 1043 aaPredicted RBP5.16□□□□□ -1.58
CCDC7-211ENST00000638889 MGAT1P26572 445 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 PTTG1IPP53801 180 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 BLOC1S1P78537 153 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 MEF2AQ02078 507 aaPredicted RBP5.16□□□□□ -1.58
CCDC7-211ENST00000638889 APBA1Q02410 837 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 MGAT5Q09328 741 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 BEAN1Q3B7T3 259 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 C19orf54Q5BKX5 351 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 CCDC62Q6P9F0 684 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 WDR11Q9BZH6 1224 aa5.16□□□□□ -1.58
CCDC7-211ENST00000638889 PRSS38A1L453 326 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 FAM83GA6ND36 823 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 LEFTY2O00292 366 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 NCR1O76036 304 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 RBP3P10745 1247 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 LMO1P25800 156 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 CD38P28907 300 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 C21orf58P58505 322 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 SART3Q15020 963 aaKnown RBP5.15□□□□□ -1.59
CCDC7-211ENST00000638889 UBE3CQ15386 1083 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 LRRTM3Q86VH5 581 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 XYLT1Q86Y38 959 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 SMC1BQ8NDV3 1235 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 NTN5Q8WTR8 489 aaPredicted RBP5.15□□□□□ -1.59
CCDC7-211ENST00000638889 SREK1Q8WXA9 508 aaKnown RBP5.15□□□□□ -1.59
CCDC7-211ENST00000638889 LINC00476Q8WZB0 136 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 CDC5LQ99459 802 aaKnown RBP5.15□□□□□ -1.59
CCDC7-211ENST00000638889 SPON1Q9HCB6 807 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 ANKFY1Q9P2R3 1169 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 PRSS50Q9UI38 385 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 KCNG1Q9UIX4 513 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 TMPRSS11EQ9UL52 423 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 COX11Q9Y6N1 276 aa5.15□□□□□ -1.59
CCDC7-211ENST00000638889 PIPSLA2A3N6 862 aa5.14□□□□□ -1.59
CCDC7-211ENST00000638889 MASP2O00187 686 aa5.14□□□□□ -1.59
CCDC7-211ENST00000638889 KIAA0355O15063 1070 aa5.14□□□□□ -1.59
CCDC7-211ENST00000638889 NDUFA10O95299 355 aa5.14□□□□□ -1.59
CCDC7-211ENST00000638889 HLA-DOAP06340 250 aa5.14□□□□□ -1.59
CCDC7-211ENST00000638889 SPATA31D3P0C874 917 aa5.14□□□□□ -1.59
CCDC7-211ENST00000638889 GUCY1B3Q02153 619 aa5.14□□□□□ -1.59
CCDC7-211ENST00000638889 NHLH2Q02577 135 aa5.14□□□□□ -1.59
CCDC7-211ENST00000638889 HNRNPA0Q13151 305 aaKnown RBP5.14□□□□□ -1.59
CCDC7-211ENST00000638889 TERF2Q15554 542 aa5.14□□□□□ -1.59
CCDC7-211ENST00000638889 DDB1Q16531 1140 aa5.14□□□□□ -1.59
CCDC7-211ENST00000638889 EFCAB12Q6NXP0 572 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms