RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CCDC73Q6ZRK6 1079 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 ABI1Q8IZP0 508 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 TMEM161BQ8NDZ6 487 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 SPIRE2Q8WWL2 714 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 PPM1EQ8WY54 764 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 STAMQ92783 540 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 CCDC51Q96ER9 411 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 ALG13Q9NP73 1137 aaKnown RBP23.99■■□□□ 1.43
SCN1B-206ENST00000638536 ODF2LQ9ULJ1 636 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 INPP5FQ9Y2H2 1132 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 TDRD15B5MCY1 1934 aaKnown RBP23.99■■□□□ 1.43
SCN1B-206ENST00000638536 GRM6O15303 877 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 HOXA2O43364 376 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 POU3F3P20264 500 aaPredicted RBP23.99■■□□□ 1.43
SCN1B-206ENST00000638536 ZNF131P52739 623 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 MICALL1Q8N3F8 863 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 FIZ1Q96SL8 496 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 APOL6Q9BWW8 343 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 TMEM134Q9H6X4 195 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 GDPD2Q9HCC8 539 aa23.99■■□□□ 1.43
SCN1B-206ENST00000638536 B4GALT3O60512 393 aa23.98■■□□□ 1.43
SCN1B-206ENST00000638536 KRT18P05783 430 aaKnown RBP23.98■■□□□ 1.43
SCN1B-206ENST00000638536 AKAP5P24588 427 aa23.98■■□□□ 1.43
SCN1B-206ENST00000638536 KRT85P78386 507 aa23.98■■□□□ 1.43
SCN1B-206ENST00000638536 SPOUT1Q5T280 376 aaKnown RBP23.98■■□□□ 1.43
SCN1B-206ENST00000638536 RESP18Q5W5W9 173 aa23.98■■□□□ 1.43
SCN1B-206ENST00000638536 SV2BQ7L1I2 683 aa23.98■■□□□ 1.43
SCN1B-206ENST00000638536 KLHL23Q8NBE8 558 aa23.98■■□□□ 1.43
SCN1B-206ENST00000638536 DDX12PQ92771 950 aa23.98■■□□□ 1.43
SCN1B-206ENST00000638536 DNAJC19Q96DA6 116 aa23.98■■□□□ 1.43
SCN1B-206ENST00000638536 PGBD4Q96DM1 585 aa23.98■■□□□ 1.43
SCN1B-206ENST00000638536 SPATA32Q96LK8 384 aa23.98■■□□□ 1.43
SCN1B-206ENST00000638536 ZHX3Q9H4I2 956 aa23.98■■□□□ 1.43
SCN1B-206ENST00000638536 PHLPP2Q6ZVD8 1323 aa23.97■■□□□ 1.43
SCN1B-206ENST00000638536 ITGB1P05556 798 aa23.97■■□□□ 1.43
SCN1B-206ENST00000638536 ITGA4P13612 1032 aa23.97■■□□□ 1.43
SCN1B-206ENST00000638536 DNAJB1P25685 340 aa23.97■■□□□ 1.43
SCN1B-206ENST00000638536 MYCT1Q8N699 235 aa23.97■■□□□ 1.43
SCN1B-206ENST00000638536 COLGALT1Q8NBJ5 622 aa23.97■■□□□ 1.43
SCN1B-206ENST00000638536 DHX58Q96C10 678 aa23.97■■□□□ 1.43
SCN1B-206ENST00000638536 TARS2Q9BW92 718 aaKnown RBP23.97■■□□□ 1.43
SCN1B-206ENST00000638536 CXCL16Q9H2A7 254 aa23.97■■□□□ 1.43
SCN1B-206ENST00000638536 RSAD1Q9HA92 442 aa23.97■■□□□ 1.43
SCN1B-206ENST00000638536 MIOSQ9NXC5 875 aa23.97■■□□□ 1.43
SCN1B-206ENST00000638536 FAM13AO94988 1023 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 CSPG5O95196 566 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 RB1P06400 928 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 MAPTP10636 758 aaKnown RBP23.96■■□□□ 1.43
SCN1B-206ENST00000638536 NCKAP1LP55160 1127 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 CAMK1Q14012 370 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 TMEM132AQ24JP5 1023 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 NOMO2Q5JPE7 1267 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 ATF7IP2Q5U623 682 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 GLB1LQ6UWU2 654 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 LRRC43Q8N309 656 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 ZFP42Q96MM3 310 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 ACO2Q99798 780 aaKnown RBP23.96■■□□□ 1.43
SCN1B-206ENST00000638536 TRIM6Q9C030 488 aaPredicted RBP23.96■■□□□ 1.43
SCN1B-206ENST00000638536 PARVGQ9HBI0 331 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 TBC1D13Q9NVG8 400 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 LARSQ9P2J5 1176 aaKnown RBP23.96■■□□□ 1.43
SCN1B-206ENST00000638536 PLAGL2Q9UPG8 496 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 RWDD3Q9Y3V2 267 aa23.96■■□□□ 1.43
SCN1B-206ENST00000638536 RBM19Q9Y4C8 960 aaKnown RBP23.96■■□□□ 1.43
SCN1B-206ENST00000638536 ZNF280BQ86YH2 543 aa23.95■■□□□ 1.43
SCN1B-206ENST00000638536 ZBTB45Q96K62 511 aaPredicted RBP23.95■■□□□ 1.43
SCN1B-206ENST00000638536 GAD1Q99259 594 aa23.95■■□□□ 1.43
SCN1B-206ENST00000638536 N4BP3O15049 544 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 POLR2DO15514 142 aaKnown RBP23.95■■□□□ 1.42
SCN1B-206ENST00000638536 DDHD2O94830 711 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 POMCP01189 267 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 NMT1P30419 496 aaKnown RBP23.95■■□□□ 1.42
SCN1B-206ENST00000638536 MLH1P40692 756 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 SMTNP53814 917 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 NUCB2P80303 420 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 TPRNQ4KMQ1 711 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 HAUS6Q7Z4H7 955 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 CNNM3Q8NE01 707 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 GSTCDQ8NEC7 633 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 SPPL3Q8TCT6 385 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 PLVAPQ9BX97 442 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 NRDE2Q9H7Z3 1164 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 PTPRHQ9HD43 1115 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 PRDM6Q9NQX0 595 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 SNTG2Q9NY99 539 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 KLK14Q9P0G3 267 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 DNAJB4Q9UDY4 337 aa23.95■■□□□ 1.42
SCN1B-206ENST00000638536 ARL5CA6NH57 179 aa23.94■■□□□ 1.42
SCN1B-206ENST00000638536 NT5C1B-RDH14C9J2C7 533 aa23.94■■□□□ 1.42
SCN1B-206ENST00000638536 ABLIM1O14639 778 aa23.94■■□□□ 1.42
SCN1B-206ENST00000638536 GTPBP6O43824 516 aaPredicted RBP23.94■■□□□ 1.42
SCN1B-206ENST00000638536 TRAK2O60296 914 aa23.94■■□□□ 1.42
SCN1B-206ENST00000638536 KCNT2Q6UVM3 1135 aa23.94■■□□□ 1.42
SCN1B-206ENST00000638536 P2RX5Q93086 422 aa23.94■■□□□ 1.42
SCN1B-206ENST00000638536 C11orf84Q9BUA3 381 aaPredicted RBP23.94■■□□□ 1.42
SCN1B-206ENST00000638536 TNFSF13BQ9Y275 285 aa23.94■■□□□ 1.42
SCN1B-206ENST00000638536 ATP6V1DQ9Y5K8 247 aa23.94■■□□□ 1.42
SCN1B-206ENST00000638536 TBCAO75347 108 aaKnown RBP23.93■■□□□ 1.42
SCN1B-206ENST00000638536 SFR1Q86XK3 245 aa23.93■■□□□ 1.42
SCN1B-206ENST00000638536 CEP120Q8N960 986 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms