RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 KRT82Q9NSB4 513 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 ETNK2Q9NVF9 386 aa12.87□□□□□ -0.35
CAPN3-221ENST00000638141 SMIM23A6NLE4 172 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 DDX3XO00571 662 aaKnown RBP eCLIP12.86□□□□□ -0.35
CAPN3-221ENST00000638141 CAPN9O14815 690 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-221ENST00000638141 GFPT2O94808 682 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 PLEKHA8P1O95397 391 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 NT5C2P49902 561 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 SEPT14Q6ZU15 432 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 HS2ST1Q7LGA3 356 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 SEPT12Q8IYM1 358 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 VGLL2Q8N8G2 317 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 ENAHQ8N8S7 591 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-221ENST00000638141 C7orf43Q8WVR3 580 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 CORO1BQ9BR76 489 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 OXCT2Q9BYC2 517 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-221ENST00000638141 CCDC113Q9H0I3 377 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 STK17AQ9UEE5 414 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 LGALS13Q9UHV8 139 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 ANGPTL2Q9UKU9 493 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 PCDHA4Q9UN74 947 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 TMED5Q9Y3A6 229 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 TBX10O75333 385 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 ZWINTO95229 277 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 SPATA31D3P0C874 917 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 OXCT1P55809 520 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 RPL26P61254 145 aaKnown RBP12.86□□□□□ -0.35
CAPN3-221ENST00000638141 CDR2Q01850 454 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 PLOD1Q02809 727 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-221ENST00000638141 PHLDB3Q6NSJ2 640 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 SPATA31D4Q6ZUB0 917 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 PROCA1Q8NCQ7 364 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-221ENST00000638141 HAUS1Q96CS2 278 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 POLR3CQ9BUI4 534 aaPredicted RBP12.86□□□□□ -0.35
CAPN3-221ENST00000638141 UBA5Q9GZZ9 404 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 UNC45AQ9H3U1 944 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 PCYOX1Q9UHG3 505 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 ADAMTS1Q9UHI8 967 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 DBR1Q9UK59 544 aaKnown RBP12.86□□□□□ -0.35
CAPN3-221ENST00000638141 TMEM98Q9Y2Y6 226 aa12.86□□□□□ -0.35
CAPN3-221ENST00000638141 PFASO15067 1338 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 FGGP02679 453 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 FGRP09769 529 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 PLCG1P19174 1290 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 PTGIRP43119 386 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 CLCN2P51788 898 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 HNRNPDQ14103 355 aaKnown RBP12.85□□□□□ -0.35
CAPN3-221ENST00000638141 GRM2Q14416 872 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 ACSBG2Q5FVE4 666 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 ACAD11Q709F0 780 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 TTLL11Q8NHH1 800 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 MGARPQ8TDB4 240 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 TUBGCP5Q96RT8 1024 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 SPZ1Q9BXG8 430 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 TRIM31Q9BZY9 425 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 TMEM60Q9H2L4 133 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 ARMT1Q9H993 441 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 CCDC22O60826 627 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 TTLL1O95922 423 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 ALAS1P13196 640 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 CYP11B2P19099 503 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 MUTP22033 750 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 SMARCA1P28370 1054 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 CRABP2P29373 138 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 CHRNA3P32297 505 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 CCNFP41002 786 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 PRKCIP41743 596 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 SLC18A1P54219 525 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 IL9RQ01113 521 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 MAP3K10Q02779 954 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 SOGA3Q5TF21 947 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 RINLQ6ZS11 566 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 CYFIP1Q7L576 1253 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 KCTD17Q8N5Z5 321 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 EEF2KMTQ96G04 330 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.85□□□□□ -0.35
CAPN3-221ENST00000638141 LSM14BQ9BX40 385 aaKnown RBP12.85□□□□□ -0.35
CAPN3-221ENST00000638141 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 TAOK3Q9H2K8 898 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 ZDHHC7Q9NXF8 308 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 NKIRAS1Q9NYS0 192 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 AMFRQ9UKV5 643 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 CHMP2BQ9UQN3 213 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 SSX2IPQ9Y2D8 614 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 PCDHA3Q9Y5H8 950 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 COL4A3BPQ9Y5P4 624 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
CAPN3-221ENST00000638141 BRWD3Q6RI45 1802 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 F8W8V4 182 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 RGL2O15211 777 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 PHF2O75151 1096 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 HNRNPCP07910 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
CAPN3-221ENST00000638141 UBTFL6P0CB48 400 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-221ENST00000638141 FCER1AP12319 257 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 SLCO1A2P46721 670 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 ACADVLP49748 655 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 SESN3P58005 492 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms