RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	ANKLE1	Q8NAG6	615 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	XXYLT1	Q8NBI6	393 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ANKRD20A12P	Q8NF67	263 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TMEM40	Q8WWA1	233 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	POMGNT1	Q8WZA1	660 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	BORCS6	Q96GS4	357 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ACO2	Q99798	780 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CELF4	Q9BZC1	486 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TRIM5	Q9C035	493 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	HAPLN2	Q9GZV7	340 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PCIF1	Q9H4Z3	704 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PTPRH	Q9HD43	1115 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	IFNK	Q9P0W0	207 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	NOD1	Q9Y239	953 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	GINS2	Q9Y248	185 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TNFSF13B	Q9Y275	285 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	FRMD4B	Q9Y2L6	1034 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TRPV2	Q9Y5S1	764 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058		A0A0B4J269	797 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058		A0A1B0GTH6	734 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058		M0QZ92	97 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	KIAA0391	O15091	583 aa	Known RBP	10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MAPK13	O15264	365 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	EXOC3	O60645	756 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CSDE1	O75534	798 aa	Known RBP	10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ERLIN2	O94905	339 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CHRNA1	P02708	482 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	EPB41	P11171	864 aa	Known RBP	10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CAPN2	P17655	700 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	THPO	P40225	353 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MTIF2	P46199	727 aa	Known RBP	10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	COPB1	P53618	953 aa	Known RBP	10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	UBASH3A	P57075	661 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MCCD1	P59942	119 aa	Predicted RBP	10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MCL1	Q07820	350 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	RBL2	Q08999	1139 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CCDC40	Q4G0X9	1142 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MIIP	Q5JXC2	388 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ATF7IP2	Q5U623	682 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	C1orf53	Q5VUE5	145 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CEP135	Q66GS9	1140 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MPZL3	Q6UWV2	235 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CREBRF	Q8IUR6	639 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TRIM59	Q8IWR1	403 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	FAM126B	Q8IXS8	530 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	FAM186B	Q8IYM0	893 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	GPD1L	Q8N335	351 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ANP32B	Q92688	251 aa	Known RBP	10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MRFAP1L1	Q96HT8	127 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	FBXL18	Q96ME1	805 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TUBGCP2	Q9BSJ2	902 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	XPO4	Q9C0E2	1151 aa	Known RBP	10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MCOLN1	Q9GZU1	580 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TRPV6	Q9H1D0	765 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	METTL14	Q9HCE5	456 aa	Known RBP	10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	INTS13	Q9NVM9	706 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TAB2	Q9NYJ8	693 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ANKFY1	Q9P2R3	1169 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CDY2A	Q9Y6F7	541 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058	BRCA2	P51587	3418 aa		10.47	□□□□□ -0.73
CACNA1A-223	ENST00000636058		A0A1B0GUA9	196 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CLDN3	O15551	220 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CBFA2T2	O43439	604 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	FAM189A1	O60320	539 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CD4	P01730	458 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ARF4	P18085	180 aa	Predicted RBP	10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SFPQ	P23246	707 aa	Known RBP eCLIP	10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	NR1I3	Q14994	352 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SNRNP35	Q16560	246 aa	Known RBP	10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MAN2A1	Q16706	1144 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	FAM26D	Q5JW98	314 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SLC39A5	Q6ZMH5	540 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ZSWIM2	Q8NEG5	633 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	DIS3L	Q8TF46	1054 aa	Known RBP	10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SAAL1	Q96ER3	474 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ZBTB45	Q96K62	511 aa	Predicted RBP	10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	NOC4L	Q9BVI4	516 aa	Known RBP	10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PDZD7	Q9H5P4	517 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	KIAA1586	Q9HCI6	787 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	RTN4	Q9NQC3	1192 aa	Known RBP	10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	AGO2	Q9UKV8	859 aa	Known RBP	10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MROH7	Q68CQ1	1323 aa		10.46	□□□□□ -0.73
CACNA1A-223	ENST00000636058	GOLGA8IP	A6NC78	632 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	GOLGA8J	A6NMD2	632 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	LGALS16	A8MUM7	142 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	N4BP3	O15049	544 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	EXTL3	O43909	919 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	LDHA	P00338	332 aa	Known RBP	10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	TPM3	P06753	285 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	ADRB2	P07550	413 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	TPM2	P07951	284 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	CTSH	P09668	335 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	MCF2	P10911	925 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	CKB	P12277	381 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	PRKCSH	P14314	528 aa	Predicted RBP	10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	FGFR4	P22455	802 aa		10.45	□□□□□ -0.74
CACNA1A-223	ENST00000636058	CDC25B	P30305	580 aa		10.45	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms