RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 NCBP1Q09161 790 aaKnown RBP15.82■□□□□ 0.12
LINC00339-208ENST00000634934 NFX1Q12986 1120 aaKnown RBP15.82■□□□□ 0.12
LINC00339-208ENST00000634934 LPIN1Q14693 890 aa15.82■□□□□ 0.12
LINC00339-208ENST00000634934 ANO6Q4KMQ2 910 aa15.82■□□□□ 0.12
LINC00339-208ENST00000634934 C11orf57Q6ZUT1 292 aaPredicted RBP15.82■□□□□ 0.12
LINC00339-208ENST00000634934 FAM228AQ86W67 206 aa15.82■□□□□ 0.12
LINC00339-208ENST00000634934 NELFBQ8WX92 580 aa15.82■□□□□ 0.12
LINC00339-208ENST00000634934 KCNN1Q92952 543 aa15.82■□□□□ 0.12
LINC00339-208ENST00000634934 DHTKD1Q96HY7 919 aaPredicted RBP15.82■□□□□ 0.12
LINC00339-208ENST00000634934 SCLYQ96I15 445 aa15.82■□□□□ 0.12
LINC00339-208ENST00000634934 TARS2Q9BW92 718 aaKnown RBP15.82■□□□□ 0.12
LINC00339-208ENST00000634934 OSBPL7Q9BZF2 842 aa15.82■□□□□ 0.12
LINC00339-208ENST00000634934 PRKAG2Q9UGJ0 569 aa15.82■□□□□ 0.12
LINC00339-208ENST00000634934 TTLL13PA6NNM8 815 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 KIAA0355O15063 1070 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 TSPAN1O60635 241 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 RAG1P15918 1043 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 CD52P31358 61 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 STX17P56962 302 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 PAK1Q13153 545 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 PAK2Q13177 524 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 MBTPS1Q14703 1052 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 AMHR2Q16671 573 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 FAM187BQ17R55 369 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 PPP4R3CPQ6ZMV5 832 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 TSHZ1Q6ZSZ6 1077 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 CPB2Q96IY4 423 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 GBP3Q9H0R5 595 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 WNT8AQ9H1J5 351 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 AGO3Q9H9G7 860 aaKnown RBP15.81■□□□□ 0.12
LINC00339-208ENST00000634934 ST3GAL5Q9UNP4 418 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 LAMA3Q16787 3333 aa15.81■□□□□ 0.12
LINC00339-208ENST00000634934 TISP43B9A030 160 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 GPR182O15218 404 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 TIMP1P01033 207 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 MATR3P43243 847 aaKnown RBP eCLIP15.8■□□□□ 0.12
LINC00339-208ENST00000634934 MAGEA10P43363 369 aaPredicted RBP15.8■□□□□ 0.12
LINC00339-208ENST00000634934 PCBP1Q15365 356 aaKnown RBP eCLIP15.8■□□□□ 0.12
LINC00339-208ENST00000634934 ATF7IP2Q5U623 682 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 PRPF38BQ5VTL8 546 aaKnown RBP15.8■□□□□ 0.12
LINC00339-208ENST00000634934 HS2ST1Q7LGA3 356 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 USP38Q8NB14 1042 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 BADQ92934 168 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 P2RX5Q93086 422 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 ACO2Q99798 780 aaKnown RBP15.8■□□□□ 0.12
LINC00339-208ENST00000634934 TSG101Q99816 390 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 NAT10Q9H0A0 1025 aaKnown RBP15.8■□□□□ 0.12
LINC00339-208ENST00000634934 KCTD10Q9H3F6 313 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 SEMA6BQ9H3T3 888 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 PADI3Q9ULW8 664 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 PIN4Q9Y237 131 aaKnown RBP15.8■□□□□ 0.12
LINC00339-208ENST00000634934 SQORQ9Y6N5 450 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 CNTNAP2Q9UHC6 1331 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 ZMYM2Q9UBW7 1377 aa15.8■□□□□ 0.12
LINC00339-208ENST00000634934 TRIM49BA6NDI0 452 aa15.79■□□□□ 0.12
LINC00339-208ENST00000634934 ANKRD63C9JTQ0 380 aa15.79■□□□□ 0.12
LINC00339-208ENST00000634934 TGFB1I1O43294 461 aa15.79■□□□□ 0.12
LINC00339-208ENST00000634934 CALUO43852 315 aaPredicted RBP15.79■□□□□ 0.12
LINC00339-208ENST00000634934 NBNO60934 754 aa15.79■□□□□ 0.12
LINC00339-208ENST00000634934 ARF4P18085 180 aaPredicted RBP15.79■□□□□ 0.12
LINC00339-208ENST00000634934 CCNE1P24864 410 aa15.79■□□□□ 0.12
LINC00339-208ENST00000634934 CENPPQ6IPU0 288 aa15.79■□□□□ 0.12
LINC00339-208ENST00000634934 ZPBP2Q6X784 338 aa15.79■□□□□ 0.12
LINC00339-208ENST00000634934 DEFB128Q7Z7B8 93 aa15.79■□□□□ 0.12
LINC00339-208ENST00000634934 CDR2LQ86X02 465 aaPredicted RBP15.79■□□□□ 0.12
LINC00339-208ENST00000634934 TCHPQ9BT92 498 aa15.79■□□□□ 0.12
LINC00339-208ENST00000634934 ERVK-5Q9HDB9 667 aa15.79■□□□□ 0.12
LINC00339-208ENST00000634934 TYW1Q9NV66 732 aaKnown RBP15.79■□□□□ 0.12
LINC00339-208ENST00000634934 ANKFY1Q9P2R3 1169 aa15.79■□□□□ 0.12
LINC00339-208ENST00000634934 BICDL2A1A5D9 508 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 PDXKO00764 312 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 CLIC2O15247 247 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 PARNO95453 639 aaKnown RBP15.78■□□□□ 0.12
LINC00339-208ENST00000634934 PIGRP01833 764 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 HARSP12081 509 aaKnown RBP15.78■□□□□ 0.12
LINC00339-208ENST00000634934 ERCC5P28715 1186 aaPredicted RBP15.78■□□□□ 0.12
LINC00339-208ENST00000634934 PMS1P54277 932 aaKnown RBP15.78■□□□□ 0.12
LINC00339-208ENST00000634934 CT47A1Q5JQC4 288 aaPredicted RBP15.78■□□□□ 0.12
LINC00339-208ENST00000634934 ANKRD40Q6AI12 368 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 SLC39A4Q6P5W5 647 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 CHRDL2Q6WN34 429 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 ZBTB33Q86T24 672 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 GOLGA5Q8TBA6 731 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 ZBTB45Q96K62 511 aaPredicted RBP15.78■□□□□ 0.12
LINC00339-208ENST00000634934 IFIH1Q9BYX4 1025 aaKnown RBP15.78■□□□□ 0.12
LINC00339-208ENST00000634934 AGPAT3Q9NRZ7 376 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 AGPAT5Q9NUQ2 364 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 RWDD2AQ9UIY3 292 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 N4BP3O15049 544 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 AP5Z1O43299 807 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 TOM1L1O75674 476 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 AXLP30530 894 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 HOXA11P31270 313 aaPredicted RBP15.78■□□□□ 0.12
LINC00339-208ENST00000634934 ZNF165P49910 485 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 SCN5AQ14524 2016 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 GPNMBQ14956 572 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 EEF1DP3Q658K8 133 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 ARMCX5Q6P1M9 558 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 NOTUMQ6P988 496 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 TMEM199Q8N511 208 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms