RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 TBC1D13Q9NVG8 400 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
LINC00339-207ENST00000634712 HES2Q9Y543 173 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 PHLPP2Q6ZVD8 1323 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 SFI1A8K8P3 1242 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 DLL1O00548 723 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 KRT18P05783 430 aaKnown RBP17.29■□□□□ 0.36
LINC00339-207ENST00000634712 PLCG1P19174 1290 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 NPTX2P47972 431 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 SMTNP53814 917 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 TFF2Q03403 129 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 BMS1Q14692 1282 aaKnown RBP17.29■□□□□ 0.36
LINC00339-207ENST00000634712 SLC39A14Q15043 492 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 SPECC1Q5M775 1068 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 PDE12Q6L8Q7 609 aaKnown RBP17.29■□□□□ 0.36
LINC00339-207ENST00000634712 APBB1IPQ7Z5R6 666 aaPredicted RBP17.29■□□□□ 0.36
LINC00339-207ENST00000634712 TMEM169Q96HH4 297 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 EPSTI1Q96J88 318 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 CCSER1Q9C0I3 900 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 RNF39Q9H2S5 420 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 NRDE2Q9H7Z3 1164 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 UBE2ZQ9H832 354 aaPredicted RBP17.29■□□□□ 0.36
LINC00339-207ENST00000634712 PARP2Q9UGN5 583 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 FBXO2Q9UK22 296 aaPredicted RBP17.29■□□□□ 0.36
LINC00339-207ENST00000634712 LZTS1Q9Y250 596 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 GIT1Q9Y2X7 761 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 MYO7AQ13402 2215 aa17.29■□□□□ 0.36
LINC00339-207ENST00000634712 NT5C1B-RDH14C9J2C7 533 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 POMCP01189 267 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 ALDH2P05091 517 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 ZSCAN22P10073 491 aaPredicted RBP17.28■□□□□ 0.36
LINC00339-207ENST00000634712 CAMK1Q14012 370 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 GPBP1Q86WP2 473 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 DAW1Q8N136 415 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 KRI1Q8N9T8 703 aaKnown RBP17.28■□□□□ 0.36
LINC00339-207ENST00000634712 CLIC6Q96NY7 704 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 GAD1Q99259 594 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 CCDC113Q9H0I3 377 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 NXF3Q9H4D5 531 aaKnown RBP17.28■□□□□ 0.36
LINC00339-207ENST00000634712 TMEM134Q9H6X4 195 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 ENTPD7Q9NQZ7 604 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 CLDND1Q9NY35 253 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 TFIP11Q9UBB9 837 aaKnown RBP17.28■□□□□ 0.36
LINC00339-207ENST00000634712 DAXXQ9UER7 740 aaPredicted RBP17.28■□□□□ 0.36
LINC00339-207ENST00000634712 REV3LO60673 3130 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 ARL5CA6NH57 179 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 SLC16A4O15374 487 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 PLS3P13797 630 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 KCNA5P22460 613 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 AKAP5P24588 427 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 IRS1P35568 1242 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 DDIT3P35638 169 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 MCM6Q14566 821 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 ATF7IP2Q5U623 682 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 TMC7Q7Z402 723 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 SLC39A11Q8N1S5 342 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 RAD54LQ92698 747 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 PABPC5Q96DU9 382 aaKnown RBP17.28■□□□□ 0.36
LINC00339-207ENST00000634712 PDZD7Q9H5P4 517 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 LARSQ9P2J5 1176 aaKnown RBP17.28■□□□□ 0.36
LINC00339-207ENST00000634712 USP20Q9Y2K6 914 aa17.28■□□□□ 0.36
LINC00339-207ENST00000634712 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.27■□□□□ 0.35
LINC00339-207ENST00000634712 NPHP3-ACAD11A0A0J9YXS1 232 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 NR1I2O75469 434 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 F13A1P00488 732 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 GALTP07902 379 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 MLH1P40692 756 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 NASPP49321 788 aaPredicted RBP17.27■□□□□ 0.35
LINC00339-207ENST00000634712 ERVFC1P60507 584 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 HYAL1Q12794 435 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 STRN3Q13033 797 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 MAPK7Q13164 816 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 DCAF4L1Q3SXM0 396 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 FOXD4L6Q3SYB3 417 aaPredicted RBP17.27■□□□□ 0.35
LINC00339-207ENST00000634712 RRAGBQ5VZM2 374 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 PLPP4Q5VZY2 271 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 FOXD4L3Q6VB84 417 aaPredicted RBP17.27■□□□□ 0.35
LINC00339-207ENST00000634712 RBM23Q86U06 439 aaKnown RBP17.27■□□□□ 0.35
LINC00339-207ENST00000634712 ZNF280BQ86YH2 543 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 SPIRE2Q8WWL2 714 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 LARP4BQ92615 738 aaKnown RBP17.27■□□□□ 0.35
LINC00339-207ENST00000634712 RPS6KC1Q96S38 1066 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 TCF25Q9BQ70 676 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 TMEM175Q9BSA9 504 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 MRPL4Q9BYD3 311 aaKnown RBP17.27■□□□□ 0.35
LINC00339-207ENST00000634712 TLE6Q9H808 572 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 NGRNQ9NPE2 291 aaKnown RBP17.27■□□□□ 0.35
LINC00339-207ENST00000634712 BLOC1S4Q9NUP1 217 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 ODF2LQ9ULJ1 636 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 FAN1Q9Y2M0 1017 aa17.27■□□□□ 0.35
LINC00339-207ENST00000634712 MORC2Q9Y6X9 1032 aaPredicted RBP17.27■□□□□ 0.35
LINC00339-207ENST00000634712 TTLL13PA6NNM8 815 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 H0YCG3 227 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 SPTLC2O15270 562 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 FAM13AO94988 1023 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 CA8P35219 290 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 NRIP1P48552 1158 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 SCNN1GP51170 649 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 AFF1P51825 1210 aaKnown RBP17.26■□□□□ 0.35
LINC00339-207ENST00000634712 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms