RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 TBX22Q9Y458 520 aa4.12□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 A0A1W2PR48 441 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 ELL2O00472 640 aaPredicted RBP4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 PCDH8O95206 1070 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 LY86O95711 162 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 GASTP01350 101 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 GCP02774 474 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 LTA4HP09960 611 aaKnown RBP4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 HNRNPLP14866 589 aaKnown RBP eCLIP4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 HSD3B2P26439 372 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 MANFP55145 182 aaKnown RBP4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 SESN3P58005 492 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 SEPT7Q16181 437 aaKnown RBP4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 DDB1Q16531 1140 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 RABL3Q5HYI8 236 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 EPHA10Q5JZY3 1008 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 COLEC12Q5KU26 742 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 ZBTB41Q5SVQ8 909 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 PAPD7Q5XG87 772 aaKnown RBP4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 DHX37Q8IY37 1157 aaKnown RBP4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 SYNE4Q8N205 404 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 NXPE1Q8N323 547 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 ATXN2LQ8WWM7 1075 aaKnown RBP4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 HAS1Q92839 578 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 SLC5A5Q92911 643 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 USP7Q93009 1102 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 IL17RAQ96F46 866 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 MNTQ99583 582 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 IFT22Q9H7X7 185 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 H2AFY2Q9P0M6 372 aaPredicted RBP4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 XDHP47989 1333 aa4.11□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 A0A087X0B3 334 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 KDM1AO60341 852 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 BRINP1O60477 761 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 PDE8AO60658 829 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 PHF2O75151 1096 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 LMNAP02545 664 aaKnown RBP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 CPEP16870 476 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 ZNF37AP17032 561 aaPredicted RBP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 MGAT1P26572 445 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 SOX5P35711 763 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 STAT3P40763 770 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 GZMKP49863 264 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 SCNN1GP51170 649 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 DUSP2Q05923 314 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 MRPL49Q13405 166 aaKnown RBP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 PCBP1Q15365 356 aaKnown RBP eCLIP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 DRICH1Q6PGQ1 229 aaPredicted RBP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 SYCE2Q6PIF2 218 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 UNQ6494/PRO21346Q6UXR6 183 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 Q6ZRM9 215 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 PDZD4Q76G19 769 aaPredicted RBP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 PRIMA1Q86XR5 153 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 PIK3C3Q8NEB9 887 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 SLC25A43Q8WUT9 341 aaPredicted RBP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 RAX2Q96IS3 184 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 ZNF496Q96IT1 587 aaPredicted RBP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 GPR101Q96P66 508 aaPredicted RBP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 DCLRE1CQ96SD1 692 aaKnown RBP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 TTC1Q99614 292 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 RIOX1Q9H6W3 641 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 SPTLC3Q9NUV7 552 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 TRPS1Q9UHF7 1281 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 PRSS50Q9UI38 385 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 MAGEL2Q9UJ55 1249 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 FZD1Q9UP38 647 aa4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 TMA7Q9Y2S6 64 aaKnown RBP4.1□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 GAGE12BA1L429 117 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 GAGE12HA6NDE8 117 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 B5MCH6 92 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 HOXA3O43365 443 aaPredicted RBP4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 RHOBTB3O94955 611 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 CLSTN1O94985 981 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 MTHFD2P13995 350 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 CRHR1P34998 444 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 TAP1Q03518 808 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 PPARAQ07869 468 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 ANO4Q32M45 955 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 ATP13A4Q4VNC1 1196 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 ARMC6Q6NXE6 501 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 FAM180AQ6UWF9 173 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 SLC41A1Q8IVJ1 513 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 OR52N2Q8NGI0 321 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 CAAP1Q9H8G2 361 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 GPRC5BQ9NZH0 403 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 ZNHIT2Q9UHR6 403 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 NOC2LQ9Y3T9 749 aaKnown RBP4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 PPP2R3BQ9Y5P8 575 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 CDY2AQ9Y6F7 541 aa4.09□□□□□ -1.75
NPHP3-ACAD11-202ENST00000632629 TLDC2A0PJX2 215 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 PRSS38A1L453 326 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 GRXCR1A8MXD5 290 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 DNAJC6O75061 913 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ITGB1P05556 798 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 MYCLP1P12525 358 aaPredicted RBP4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 CD69Q07108 199 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 VPS72Q15906 364 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 FSCN1Q16658 493 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms