RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 EPCAMP16422 314 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 GLRA2P23416 452 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 CA8P35219 290 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 DSC1Q08554 894 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 COLGALT2Q8IYK4 626 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 TMEM87AQ8NBN3 555 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 PBXIP1Q96AQ6 731 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 ASIC4Q96FT7 647 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 CCDC43Q96MW1 224 aaKnown RBP13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 LLPHQ9BRT6 129 aaKnown RBP13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 HERC2P3Q9BVR0 1158 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 EIF2AQ9BY44 585 aaKnown RBP13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 TMEM60Q9H2L4 133 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 TUFT1Q9NNX1 390 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 GIT1Q9Y2X7 761 aa13.85□□□□□ -0.19
SOX2-OT-247ENST00000628347 DENND4AQ7Z401 1863 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 ARL5CA6NH57 179 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 POTEMA6NI47 508 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 C2CD4DB7Z1M9 353 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 INO80B-WBP1J3KQ70 363 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 POMCP01189 267 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 SPATA31C1P0DKV0 1188 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 ARF4P18085 180 aaPredicted RBP13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 NHLH1Q02575 133 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 SAFBQ15424 915 aaKnown RBP eCLIP13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 RARS2Q5T160 578 aaKnown RBP13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 RNF168Q8IYW5 571 aaPredicted RBP13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 FBXL6Q8N531 539 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 PIGOQ8TEQ8 1089 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 CPB2Q96IY4 423 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 KLHL5Q96PQ7 755 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 PRRX2Q99811 253 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 POLR3CQ9BUI4 534 aaPredicted RBP13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 EMILIN2Q9BXX0 1053 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 SFXN1Q9H9B4 322 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 MARCH5Q9NX47 278 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 CDH22Q9UJ99 828 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 DBR1Q9UK59 544 aaKnown RBP13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 USTQ9Y2C2 406 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 SSX2IPQ9Y2D8 614 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 KMT2EQ8IZD2 1858 aa13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 TDRD15B5MCY1 1934 aaKnown RBP13.84□□□□□ -0.19
SOX2-OT-247ENST00000628347 MYO10Q9HD67 2058 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 SEC24BO95487 1268 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 CNPP09543 421 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 CLCN4P51793 760 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 FOSBP53539 338 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 ATAT1Q5SQI0 421 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 CDCA2Q69YH5 1023 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 CABP7Q86V35 215 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 CATSPER3Q86XQ3 398 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 SUGP1Q8IWZ8 645 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 HACE1Q8IYU2 909 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 ZDHHC14Q8IZN3 488 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 C12orf76Q8N812 135 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 MCPH1Q8NEM0 835 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 PRIMPOLQ96LW4 560 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 GAD1Q99259 594 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 POLR3FQ9H1D9 316 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 FOXP1Q9H334 677 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 MRPL17Q9NRX2 175 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 MIOSQ9NXC5 875 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 SORCS3Q9UPU3 1222 aa13.83□□□□□ -0.2
SOX2-OT-247ENST00000628347 A0A1B0GUA9 196 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 USO1O60763 962 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 MED24O75448 989 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 C1RP00736 705 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 URODP06132 367 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 MUTP22033 750 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 KLRC2P26717 231 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 MCM7P33993 719 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 MLH1P40692 756 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 SCNN1GP51170 649 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 FAM187BQ17R55 369 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 SLC27A1Q6PCB7 646 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 GPR149Q86SP6 731 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 GPR65Q8IYL9 337 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 UBALD2Q8IYN6 164 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 PLCD3Q8N3E9 789 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 TDRD5Q8NAT2 981 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 KREMEN2Q8NCW0 462 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 CMASQ8NFW8 434 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 C8orf76Q96K31 380 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 NACC1Q96RE7 527 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 RPS6KC1Q96S38 1066 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 RHOBTB2Q9BYZ6 727 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 TRIM6Q9C030 488 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 RXFP1Q9HBX9 757 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 PRMT7Q9NVM4 692 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 HES2Q9Y543 173 aa13.82□□□□□ -0.2
SOX2-OT-247ENST00000628347 B4GALT5O43286 388 aa13.81□□□□□ -0.2
SOX2-OT-247ENST00000628347 NR1I2O75469 434 aa13.81□□□□□ -0.2
SOX2-OT-247ENST00000628347 PAPLNO95428 1278 aa13.81□□□□□ -0.2
SOX2-OT-247ENST00000628347 OR52Z1P0C646 297 aa13.81□□□□□ -0.2
SOX2-OT-247ENST00000628347 SP100P23497 879 aaPredicted RBP13.81□□□□□ -0.2
SOX2-OT-247ENST00000628347 RPA1P27694 616 aa13.81□□□□□ -0.2
SOX2-OT-247ENST00000628347 OR1G1P47890 313 aa13.81□□□□□ -0.2
SOX2-OT-247ENST00000628347 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms