RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 CNGA2Q16280 664 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 OOSP2Q86WS3 158 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 VSTM4Q8IW00 320 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 XXYLT1Q8NBI6 393 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 PPP1R14AQ96A00 147 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 HES6Q96HZ4 224 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 DEPDC7Q96QD5 511 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 FBXO2Q9UK22 296 aaPredicted RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 PALD1Q9ULE6 856 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 ABT1Q9ULW3 272 aaKnown RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 PNMA6EA0A0J9YXQ4 647 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 GMNCA6NCL1 334 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 CFAP99D6REC4 459 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 PDHA1P08559 390 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 RGS2P41220 211 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 PPP2R2AP63151 447 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 USP39Q53GS9 565 aaKnown RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 BTBD8Q5XKL5 378 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 TMED8Q6PL24 325 aaPredicted RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 FOXP4Q8IVH2 680 aaPredicted RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 TGS1Q96RS0 853 aaKnown RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 DNAJC12Q9UKB3 198 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 MAN1B1Q9UKM7 699 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 SNX24Q9Y343 169 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 PRXQ9BXM0 1461 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 PFASO15067 1338 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 TMEM191CA6NGB0 347 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 BRAFP15056 766 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 CDK17Q00537 523 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 TBL3Q12788 808 aaKnown RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 NLRP9Q7RTR0 991 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 KRT77Q7Z794 578 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 DDX17Q92841 729 aaKnown RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 MRPL1Q9BYD6 325 aaKnown RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 PPCSQ9HAB8 311 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 ETNK1Q9HBU6 452 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 EXOSC4Q9NPD3 245 aaKnown RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 TBC1D22BQ9NU19 505 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 USE1Q9NZ43 259 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 ZMYM3Q14202 1370 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 PNMA6FA0A0J9YX94 578 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 LRRC53A6NM62 1247 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 PSMA4P25789 261 aaKnown RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 COPB2P35606 906 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 TMED10P49755 219 aaKnown RBP9.44□□□□□ -0.9
GABRB3-216ENST00000628124 LLGL1Q15334 1064 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 ANO4Q32M45 955 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 ZNF568Q3ZCX4 644 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 C16orf89Q6UX73 402 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 KCTD1Q719H9 257 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 ADCK2Q7Z695 626 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 CCDC24Q8N4L8 307 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 RBBP8Q99708 897 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 OLFM1Q99784 485 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 LZTS1Q9Y250 596 aa9.44□□□□□ -0.9
GABRB3-216ENST00000628124 PRPF3O43395 683 aaKnown RBP9.43□□□□□ -0.9
GABRB3-216ENST00000628124 TRAPPC3O43617 180 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 RAD23BP54727 409 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 CAPRIN2Q6IMN6 1127 aaKnown RBP9.43□□□□□ -0.9
GABRB3-216ENST00000628124 RHOT1Q8IXI2 618 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 SSH3Q8TE77 659 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 KRT35Q92764 455 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 COA7Q96BR5 231 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 SNF8Q96H20 258 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 SYNDIG1Q9H7V2 258 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 CYP4F11Q9HBI6 524 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 SH3GLB2Q9NR46 395 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 SUPT3HB4E1H0 165 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 MEFVO15553 781 aaPredicted RBP9.43□□□□□ -0.9
GABRB3-216ENST00000628124 PDE8BO95263 885 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 KRT14P02533 472 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 RGS4P49798 205 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 PEX3P56589 373 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 KRT76Q01546 638 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 C6orf10Q5SRN2 563 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 FAM180AQ6UWF9 173 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 SETD3Q86TU7 594 aaPredicted RBP9.43□□□□□ -0.9
GABRB3-216ENST00000628124 PIGSQ96S52 555 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 FOXP3Q9BZS1 431 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 WNT8AQ9H1J5 351 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 ZFATQ9P243 1243 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 ADAMTS1Q9UHI8 967 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 TBX22Q9Y458 520 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 A0A0D9SFI3 127 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 KIF1CO43896 1103 aaKnown RBP9.43□□□□□ -0.9
GABRB3-216ENST00000628124 FKBP9O95302 570 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 MMP1P03956 469 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 WLSQ5T9L3 541 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 FKBP9P1Q75LS8 142 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 TNIP3Q96KP6 325 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 NDUFB9Q9Y6M9 179 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 FAM135BQ49AJ0 1406 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 M0QYV0 167 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 TLR2O60603 784 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 ALDH1A2O94788 518 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 STAT3P40763 770 aa9.43□□□□□ -0.9
GABRB3-216ENST00000628124 CACNB1Q02641 598 aaPredicted RBP9.43□□□□□ -0.9
GABRB3-216ENST00000628124 SFSWAPQ12872 951 aaKnown RBP9.43□□□□□ -0.9
GABRB3-216ENST00000628124 PDAP1Q13442 181 aaKnown RBP9.43□□□□□ -0.9
GABRB3-216ENST00000628124 STAT4Q14765 748 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms