RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PRKCBP05771 671 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 SARSP49591 514 aaKnown RBP16.19■□□□□ 0.18
PNKP-221ENST00000627317 FAM189BP81408 668 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 NCBP1Q09161 790 aaKnown RBP16.19■□□□□ 0.18
PNKP-221ENST00000627317 COASYQ13057 564 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 PCBP1Q15365 356 aaKnown RBP eCLIP16.19■□□□□ 0.18
PNKP-221ENST00000627317 MAPK6Q16659 721 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 TMEM132AQ24JP5 1023 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 HERC4Q5GLZ8 1057 aaPredicted RBP16.19■□□□□ 0.18
PNKP-221ENST00000627317 TIGD1Q96MW7 591 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 SAMD11Q96NU1 681 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 ADAM2Q99965 735 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 PRMT7Q9NVM4 692 aaPredicted RBP16.19■□□□□ 0.18
PNKP-221ENST00000627317 LMCD1Q9NZU5 365 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 ARHGAP28Q9P2N2 729 aa16.19■□□□□ 0.18
PNKP-221ENST00000627317 PIN4Q9Y237 131 aaKnown RBP16.19■□□□□ 0.18
PNKP-221ENST00000627317 PRRC2BQ5JSZ5 2229 aaKnown RBP16.19■□□□□ 0.18
PNKP-221ENST00000627317 DENND3A2RUS2 1198 aa16.18■□□□□ 0.18
PNKP-221ENST00000627317 C5orf67F2Z3F1 127 aa16.18■□□□□ 0.18
PNKP-221ENST00000627317 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
PNKP-221ENST00000627317 NCKAP1LP55160 1127 aa16.18■□□□□ 0.18
PNKP-221ENST00000627317 POSTNQ15063 836 aa16.18■□□□□ 0.18
PNKP-221ENST00000627317 CCDC85BQ15834 202 aaPredicted RBP16.18■□□□□ 0.18
PNKP-221ENST00000627317 UNC13DQ70J99 1090 aa16.18■□□□□ 0.18
PNKP-221ENST00000627317 TMEM192Q8IY95 271 aa16.18■□□□□ 0.18
PNKP-221ENST00000627317 CMTR2Q8IYT2 770 aaKnown RBP16.18■□□□□ 0.18
PNKP-221ENST00000627317 FBXO22Q8NEZ5 403 aa16.18■□□□□ 0.18
PNKP-221ENST00000627317 CCDC47Q96A33 483 aaKnown RBP16.18■□□□□ 0.18
PNKP-221ENST00000627317 CCDC113Q9H0I3 377 aa16.18■□□□□ 0.18
PNKP-221ENST00000627317 MRPL44Q9H9J2 332 aaKnown RBP16.18■□□□□ 0.18
PNKP-221ENST00000627317 C1orf112Q9NSG2 853 aa16.18■□□□□ 0.18
PNKP-221ENST00000627317 EXOC1Q9NV70 894 aa16.18■□□□□ 0.18
PNKP-221ENST00000627317 H3BNC9 293 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 K7ERI5 159 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 TSPAN1O60635 241 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 ZSCAN20P17040 1043 aaPredicted RBP16.17■□□□□ 0.18
PNKP-221ENST00000627317 SCP2P22307 547 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 ABCD1P33897 745 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 GATMP50440 423 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 STRN3Q13033 797 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 SLC24A5Q71RS6 500 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 HAUS6Q7Z4H7 955 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 FIBCD1Q8N539 461 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 TMEM161BQ8NDZ6 487 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 PPM1EQ8WY54 764 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 PRIMPOLQ96LW4 560 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 NTPCRQ9BSD7 190 aaKnown RBP16.17■□□□□ 0.18
PNKP-221ENST00000627317 TMEM134Q9H6X4 195 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 OLFML3Q9NRN5 406 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 AGPAT5Q9NUQ2 364 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 TBC1D7Q9P0N9 293 aa16.17■□□□□ 0.18
PNKP-221ENST00000627317 MRPL42Q9Y6G3 142 aaKnown RBP16.17■□□□□ 0.18
PNKP-221ENST00000627317 PVALEFA0A1B0GWK0 134 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 SMC2O95347 1197 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 GCNT3O95395 438 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 RPN1P04843 607 aaKnown RBP16.16■□□□□ 0.18
PNKP-221ENST00000627317 MAPTP10636 758 aaKnown RBP16.16■□□□□ 0.18
PNKP-221ENST00000627317 NMT1P30419 496 aaKnown RBP16.16■□□□□ 0.18
PNKP-221ENST00000627317 AXLP30530 894 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 MCM4P33991 863 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 DPYDQ12882 1025 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 PNOCQ13519 176 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 PRPF4BQ13523 1007 aaKnown RBP16.16■□□□□ 0.18
PNKP-221ENST00000627317 AMHR2Q16671 573 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 FAM187BQ17R55 369 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 FAM26FQ5R3K3 315 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 TWF2Q6IBS0 349 aaKnown RBP16.16■□□□□ 0.18
PNKP-221ENST00000627317 NOTUMQ6P988 496 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 MICALL1Q8N3F8 863 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 FZD8Q9H461 694 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 RNF19AQ9NV58 838 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 THEGQ9P2T0 379 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 RALGAPA2Q2PPJ7 1873 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 CNTNAP2Q9UHC6 1331 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 MYO9BQ13459 2157 aa16.16■□□□□ 0.18
PNKP-221ENST00000627317 ACKR2O00590 384 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 B4GALT5O43286 388 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 MBD3O95983 291 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 STAG3L1P0CL83 205 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 IBSPP21815 317 aaPredicted RBP16.15■□□□□ 0.18
PNKP-221ENST00000627317 BMPR1AP36894 532 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 ALCAMQ13740 583 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 BTG3Q14201 252 aaPredicted RBP16.15■□□□□ 0.18
PNKP-221ENST00000627317 STXBP4Q6ZWJ1 553 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 HVCN1Q96D96 273 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 MRPL38Q96DV4 380 aaKnown RBP16.15■□□□□ 0.18
PNKP-221ENST00000627317 CCDC51Q96ER9 411 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 BICD1Q96G01 975 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 CPB2Q96IY4 423 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 FIZ1Q96SL8 496 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 MRPL4Q9BYD3 311 aaKnown RBP16.15■□□□□ 0.18
PNKP-221ENST00000627317 ELAC1Q9H777 363 aaKnown RBP16.15■□□□□ 0.18
PNKP-221ENST00000627317 CHST12Q9NRB3 414 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 TMEM161AQ9NX61 479 aa16.15■□□□□ 0.18
PNKP-221ENST00000627317 N4BP3O15049 544 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 KLRC4O43908 158 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 ATF7P17544 494 aaPredicted RBP16.14■□□□□ 0.17
PNKP-221ENST00000627317 ARF4P18085 180 aaPredicted RBP16.14■□□□□ 0.17
PNKP-221ENST00000627317 CTNNB1P35222 781 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms