RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 KRT17Q04695 432 aa18.44■□□□□ 0.54
UBE3D-208ENST00000626828 UBE3AQ05086 875 aa18.44■□□□□ 0.54
UBE3D-208ENST00000626828 RNASELQ05823 741 aaKnown RBP18.44■□□□□ 0.54
UBE3D-208ENST00000626828 SKIV2LQ15477 1246 aaKnown RBP18.44■□□□□ 0.54
UBE3D-208ENST00000626828 FOXD4L6Q3SYB3 417 aaPredicted RBP18.44■□□□□ 0.54
UBE3D-208ENST00000626828 FOXD4L3Q6VB84 417 aaPredicted RBP18.44■□□□□ 0.54
UBE3D-208ENST00000626828 CCDC73Q6ZRK6 1079 aa18.44■□□□□ 0.54
UBE3D-208ENST00000626828 THNSL1Q8IYQ7 743 aa18.44■□□□□ 0.54
UBE3D-208ENST00000626828 ADPGKQ9BRR6 497 aa18.44■□□□□ 0.54
UBE3D-208ENST00000626828 KIFC3Q9BVG8 833 aa18.44■□□□□ 0.54
UBE3D-208ENST00000626828 RNF39Q9H2S5 420 aa18.44■□□□□ 0.54
UBE3D-208ENST00000626828 SPG21Q9NZD8 308 aa18.44■□□□□ 0.54
UBE3D-208ENST00000626828 INPP5FQ9Y2H2 1132 aa18.44■□□□□ 0.54
UBE3D-208ENST00000626828 GIT1Q9Y2X7 761 aa18.44■□□□□ 0.54
UBE3D-208ENST00000626828 NPHP3-ACAD11A0A0J9YXS1 232 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 H0YCG3 227 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 CUTAO60888 179 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 FGF18O76093 207 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 BRD1O95696 1058 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 KRT18P05783 430 aaKnown RBP18.43■□□□□ 0.54
UBE3D-208ENST00000626828 PPM1AP35813 382 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 PLCB3Q01970 1234 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 GIT2Q14161 759 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 TIGD5Q53EQ6 642 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 SV2BQ7L1I2 683 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 APBB1IPQ7Z5R6 666 aaPredicted RBP18.43■□□□□ 0.54
UBE3D-208ENST00000626828 CDR2LQ86X02 465 aaPredicted RBP18.43■□□□□ 0.54
UBE3D-208ENST00000626828 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.43■□□□□ 0.54
UBE3D-208ENST00000626828 KCNG4Q8TDN1 519 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 LRRC15Q8TF66 581 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 POF1BQ8WVV4 589 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 PANK2Q9BZ23 570 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 TBC1D13Q9NVG8 400 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 ARHGAP28Q9P2N2 729 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 HCSTQ9UBK5 93 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 COG5Q9UP83 839 aa18.43■□□□□ 0.54
UBE3D-208ENST00000626828 TTLL13PA6NNM8 815 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 SLC16A4O15374 487 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 ALDH2P05091 517 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 BCAR1P56945 870 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 NT5DC1Q5TFE4 455 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 ATF7IP2Q5U623 682 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 MYCT1Q8N699 235 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 FAM193BQ96PV7 902 aaPredicted RBP18.42■□□□□ 0.54
UBE3D-208ENST00000626828 PDZD7Q9H5P4 517 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 NSUN3Q9H649 340 aaKnown RBP18.42■□□□□ 0.54
UBE3D-208ENST00000626828 NRDE2Q9H7Z3 1164 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 RCOR1Q9UKL0 485 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 LZTS1Q9Y250 596 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 TNFSF13BQ9Y275 285 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 HES2Q9Y543 173 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 KIAA1671Q9BY89 1806 aa18.42■□□□□ 0.54
UBE3D-208ENST00000626828 MYH15Q9Y2K3 1946 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 INPPL1O15357 1258 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 NCK2O43639 380 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 FAM13AO94988 1023 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 SCP2P22307 547 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 CACNB1Q02641 598 aaPredicted RBP18.41■□□□□ 0.54
UBE3D-208ENST00000626828 DNM1Q05193 864 aaKnown RBP18.41■□□□□ 0.54
UBE3D-208ENST00000626828 STRN3Q13033 797 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 CAMK1Q14012 370 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 PDE12Q6L8Q7 609 aaKnown RBP18.41■□□□□ 0.54
UBE3D-208ENST00000626828 MICAL1Q8TDZ2 1067 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 ATXN2LQ8WWM7 1075 aaKnown RBP18.41■□□□□ 0.54
UBE3D-208ENST00000626828 MRPS27Q92552 414 aaKnown RBP18.41■□□□□ 0.54
UBE3D-208ENST00000626828 GAD1Q99259 594 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 ACO2Q99798 780 aaKnown RBP18.41■□□□□ 0.54
UBE3D-208ENST00000626828 REEP2Q9BRK0 252 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 APOL6Q9BWW8 343 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 MRPL4Q9BYD3 311 aaKnown RBP18.41■□□□□ 0.54
UBE3D-208ENST00000626828 PARVGQ9HBI0 331 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 PRDM6Q9NQX0 595 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 PARP2Q9UGN5 583 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 USP20Q9Y2K6 914 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 ZDHHC9Q9Y397 364 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 ATP6V1DQ9Y5K8 247 aa18.41■□□□□ 0.54
UBE3D-208ENST00000626828 ARL5CA6NH57 179 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 GALTP07902 379 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 AKAP5P24588 427 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 DNAJB1P25685 340 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 STAT6P42226 847 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 ZNF131P52739 623 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 DCAF4L1Q3SXM0 396 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 ZNF280BQ86YH2 543 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 SLC39A11Q8N1S5 342 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 TMEM161BQ8NDZ6 487 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 HLA-CQ95604 372 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 PPP2R3CQ969Q6 453 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 NXF3Q9H4D5 531 aaKnown RBP18.4■□□□□ 0.54
UBE3D-208ENST00000626828 THEGQ9P2T0 379 aa18.4■□□□□ 0.54
UBE3D-208ENST00000626828 COL4A4P53420 1690 aaPredicted RBP18.4■□□□□ 0.54
UBE3D-208ENST00000626828 ZC3H11AO75152 810 aaKnown RBP eCLIP18.39■□□□□ 0.53
UBE3D-208ENST00000626828 TBCAO75347 108 aaKnown RBP18.39■□□□□ 0.53
UBE3D-208ENST00000626828 DDHD2O94830 711 aa18.39■□□□□ 0.53
UBE3D-208ENST00000626828 POMCP01189 267 aa18.39■□□□□ 0.53
UBE3D-208ENST00000626828 EDN1P05305 212 aa18.39■□□□□ 0.53
UBE3D-208ENST00000626828 ABCD1P33897 745 aa18.39■□□□□ 0.53
UBE3D-208ENST00000626828 ME1P48163 572 aa18.39■□□□□ 0.53
UBE3D-208ENST00000626828 AFF1P51825 1210 aaKnown RBP18.39■□□□□ 0.53
UBE3D-208ENST00000626828 AAK1Q2M2I8 961 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms