RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ZPBP2Q6X784 338 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 USP49Q70CQ1 688 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 MYCT1Q8N699 235 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 LEO1Q8WVC0 666 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 PPP2R3CQ969Q6 453 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 HVCN1Q96D96 273 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 C17orf80Q9BSJ5 609 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 PCDHA7Q9UN72 937 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 TNFSF13BQ9Y275 285 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 ZDHHC9Q9Y397 364 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 IPPQ9Y573 584 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 CHD9Q3L8U1 2897 aa15.4■□□□□ 0.06
SNRPA1-216ENST00000626000 FSD2A1L4K1 749 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 INPPL1O15357 1258 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 TRAK2O60296 914 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 IGFBP4P22692 258 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 CMA1P23946 247 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 NCKAP1LP55160 1127 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 RNASELQ05823 741 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 GPM6BQ13491 265 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 GIT2Q14161 759 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 BMS1Q14692 1282 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 KYAT1Q16773 422 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 CLLU1OSQ5K130 101 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 UBXN11Q5T124 520 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 ATF7IP2Q5U623 682 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 RESP18Q5W5W9 173 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 PDE12Q6L8Q7 609 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 SHC4Q6S5L8 630 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 STXBP4Q6ZWJ1 553 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 FAM178BQ8IXR5 827 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 TMEM161BQ8NDZ6 487 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 MAFAQ8NHW3 353 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 CPB2Q96IY4 423 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 ZNF558Q96NG5 402 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 CASD1Q96PB1 797 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 ST6GALNAC4Q9H4F1 302 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 PUF60Q9UHX1 559 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 MTUS1Q9ULD2 1270 aa15.39■□□□□ 0.05
SNRPA1-216ENST00000626000 COL4A4P53420 1690 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 SLC16A4O15374 487 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 B4GALT5O43286 388 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 NR1I2O75469 434 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 TOM1L1O75674 476 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 ARHGEF15O94989 841 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 MYL1P05976 194 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 LIG1P18858 919 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 ALDH7A1P49419 539 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 KRT17Q04695 432 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 RAD51AP2Q09MP3 1159 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 CNNM4Q6P4Q7 775 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 HAUS6Q7Z4H7 955 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 CCDC65Q8IXS2 484 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 CEP57L1Q8IYX8 460 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 PDILTQ8N807 584 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 HELQQ8TDG4 1101 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 DDX12PQ92771 950 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 MRPL38Q96DV4 380 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 FAM193BQ96PV7 902 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 RPS6KC1Q96S38 1066 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 TMEM175Q9BSA9 504 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 KIFC3Q9BVG8 833 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 ZHX3Q9H4I2 956 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 PDZD7Q9H5P4 517 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 CERS4Q9HA82 394 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 OLFML3Q9NRN5 406 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 TOPORSQ9NS56 1045 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 TYW1Q9NV66 732 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 KBTBD4Q9NVX7 518 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 LZTS1Q9Y250 596 aa15.38■□□□□ 0.05
SNRPA1-216ENST00000626000 A0A1W2PQ27 194 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 A0A1W2PQ64 194 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 A0A1W2PQD8 194 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 SFI1A8K8P3 1242 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 K7ENM7 598 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 NCK2O43639 380 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 OFD1O75665 1012 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 NPTXRO95502 500 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 LINC00271P0C7V0 271 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 MCF2P10911 925 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 ZNF568Q3ZCX4 644 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 MPZL3Q6UWV2 235 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 AGMOQ6ZNB7 445 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 THNSL1Q8IYQ7 743 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 SMG8Q8ND04 991 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 TCHPQ9BT92 498 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 CCDC94Q9BW85 323 aaPredicted RBP15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 RNF19AQ9NV58 838 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 KCNH3Q9ULD8 1083 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 EXOC7Q9UPT5 735 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 MTCH2Q9Y6C9 303 aa15.37■□□□□ 0.05
SNRPA1-216ENST00000626000 KIAA1671Q9BY89 1806 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 GOLGA6L4A6NEF3 574 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 POLR2DO15514 142 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 GATMP50440 423 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 YARSP54577 528 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 PLCB3Q01970 1234 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 GRIK3Q13003 919 aa15.36■□□□□ 0.05
SNRPA1-216ENST00000626000 E2F4Q16254 413 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms