RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 GPNMBQ14956 572 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 RRAGBQ5VZM2 374 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 TWF2Q6IBS0 349 aaKnown RBP7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 FAM109BQ6ICB4 259 aaPredicted RBP7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 SRGAP1Q7Z6B7 1085 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 TMCO2Q7Z6W1 182 aaPredicted RBP7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 FAM228AQ86W67 206 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 GPBP1Q86WP2 473 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 ABI1Q8IZP0 508 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 LINC01465Q8N7H1 131 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 LINC00301Q8NCQ3 95 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 FAM174AQ8TBP5 190 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 TMEM40Q8WWA1 233 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 KIFAP3Q92845 792 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 EPSTI1Q96J88 318 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 DRC1Q96MC2 740 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 FAM161BQ96MY7 647 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 CLIC6Q96NY7 704 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 ADAM2Q99965 735 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 OSBPL7Q9BZF2 842 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 NKX2-4Q9H2Z4 354 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 ADAMTS10Q9H324 1103 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 ERVK-5Q9HDB9 667 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 C1orf112Q9NSG2 853 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 DACT1Q9NYF0 836 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 FAM13BQ9NYF5 915 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 PCDHB7Q9Y5E2 793 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 PCDHA11Q9Y5I1 949 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 SRPRBQ9Y5M8 271 aaKnown RBP7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 GBF1Q92538 1859 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 BRCA2P51587 3418 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 GOLGA6L4A6NEF3 574 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 LILRB3O75022 631 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 HIP1RO75146 1068 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 PPP6R2O75170 966 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 FAM13AO94988 1023 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 BRD1O95696 1058 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 PLA2G4BP0C869 781 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 FXR1P51114 621 aaKnown RBP eCLIP7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 CAPSQ13938 189 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 ARID5BQ14865 1188 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 ECM1Q16610 540 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 TCTN1Q2MV58 587 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 TMEM119Q4V9L6 283 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 SPOUT1Q5T280 376 aaKnown RBP7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 RASIP1Q5U651 963 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 CCDC73Q6ZRK6 1079 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 NPAS4Q8IUM7 802 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 KCTD17Q8N5Z5 321 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 PDILTQ8N807 584 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 ASAP3Q8TDY4 903 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 LARP4BQ92615 738 aaKnown RBP7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 CEP89Q96ST8 783 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 MMTAG2Q9BU76 263 aaKnown RBP7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 TIPINQ9BVW5 301 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 PBX4Q9BYU1 374 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 TRIM6Q9C030 488 aaPredicted RBP7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 CCSER1Q9C0I3 900 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 C2orf40Q9H1Z8 148 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 XPNPEP1Q9NQW7 623 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 STK17AQ9UEE5 414 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 INSL6Q9Y581 213 aa7.98□□□□□ -1.13
NPLOC4-221ENST00000625705 RBAK-RBAKDNI3L0D1 243 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 ENPP3O14638 875 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 GJB5O95377 273 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 CA3P07451 260 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 SKIP12755 728 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 MYOGP15173 224 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 GLRA2P23416 452 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 ARL2P36404 184 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 NAMPTP43490 491 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 SARSP49591 514 aaKnown RBP7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 SMTNP53814 917 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 PEX3P56589 373 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 STRN3Q13033 797 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 BTG3Q14201 252 aaPredicted RBP7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 MCM6Q14566 821 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 AGERQ15109 404 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 MAPK6Q16659 721 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 PAN2Q504Q3 1202 aaKnown RBP7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 HYIQ5T013 277 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 NOTUMQ6P988 496 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 FAM43BQ6ZT52 329 aaPredicted RBP7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 SLC24A5Q71RS6 500 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 SV2BQ7L1I2 683 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 KCNK18Q7Z418 384 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 APBB1IPQ7Z5R6 666 aaPredicted RBP7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 HACE1Q8IYU2 909 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 DEFB123Q8N688 67 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 SYT2Q8N9I0 419 aaPredicted RBP7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 RAD54LQ92698 747 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 DHX58Q96C10 678 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 VWCEQ96DN2 955 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 PNMA5Q96PV4 448 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 RAD9AQ99638 391 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 RUSC1Q9BVN2 902 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 PANK2Q9BZ23 570 aa7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 SCAND2PQ9GZW5 306 aaPredicted RBP7.97□□□□□ -1.13
NPLOC4-221ENST00000625705 KMT5AQ9NQR1 393 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms