RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 CKAP2Q8WWK9 683 aa23.29■■□□□ 1.32
PCSK6-220ENST00000622483 DNAJC19Q96DA6 116 aa23.29■■□□□ 1.32
PCSK6-220ENST00000622483 RBM41Q96IZ5 413 aaKnown RBP23.29■■□□□ 1.32
PCSK6-220ENST00000622483 EMILIN3Q9NT22 766 aa23.29■■□□□ 1.32
PCSK6-220ENST00000622483 PRKAG3Q9UGI9 489 aa23.29■■□□□ 1.32
PCSK6-220ENST00000622483 ABCB11O95342 1321 aa23.29■■□□□ 1.32
PCSK6-220ENST00000622483 DUOX1Q9NRD9 1551 aa23.29■■□□□ 1.32
PCSK6-220ENST00000622483 RASA1P20936 1047 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 VPS36Q86VN1 386 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 GCNT4Q9P109 453 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 RPS6KL1Q9Y6S9 549 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 FAM196BA6NMK8 535 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 NVLO15381 856 aaKnown RBP23.28■■□□□ 1.32
PCSK6-220ENST00000622483 NPTXRO95502 500 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 CETPP11597 493 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 CCNB1P14635 433 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 CNGA1P29973 690 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 SETDB1Q15047 1291 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 HP1BP3Q5SSJ5 553 aaPredicted RBP23.28■■□□□ 1.32
PCSK6-220ENST00000622483 CAPN12Q6ZSI9 719 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 CTNNBL1Q8WYA6 563 aaPredicted RBP23.28■■□□□ 1.32
PCSK6-220ENST00000622483 LRRC37BQ96QE4 947 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 COG5Q9UP83 839 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 PLSCR1O15162 318 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 LRRN2O75325 713 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 ARHGAP44Q17R89 818 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 PIGSQ96S52 555 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 KIAA1024Q9UPX6 916 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 PCNTO95613 3336 aa23.28■■□□□ 1.32
PCSK6-220ENST00000622483 CETN3O15182 167 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 ATMINO43313 823 aaPredicted RBP23.27■■□□□ 1.32
PCSK6-220ENST00000622483 EAPPQ56P03 285 aaPredicted RBP23.27■■□□□ 1.32
PCSK6-220ENST00000622483 OR52E8Q6IFG1 317 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 DZIP1Q86YF9 867 aaKnown RBP23.27■■□□□ 1.32
PCSK6-220ENST00000622483 LRRC8CQ8TDW0 803 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 BTBD6Q96KE9 485 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 SCOCQ9UIL1 159 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 USH1CQ9Y6N9 552 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 RCN1Q15293 331 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 ZNF746Q6NUN9 644 aaPredicted RBP23.27■■□□□ 1.32
PCSK6-220ENST00000622483 FAM118BQ9BPY3 351 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 BRIP1Q9BX63 1249 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 STMN4Q9H169 189 aaPredicted RBP23.27■■□□□ 1.32
PCSK6-220ENST00000622483 SH3GLB2Q9NR46 395 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 TXLNGQ9NUQ3 528 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 BCORQ6W2J9 1755 aa23.27■■□□□ 1.32
PCSK6-220ENST00000622483 KRT36O76013 467 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 ZBTB7AO95365 584 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 SLURP2P0DP57 97 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 PTGIRP43119 386 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 CACNA2D1P54289 1103 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 TMEM266Q2M3C6 531 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 DSTYKQ6XUX3 929 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 KRT25Q7Z3Z0 450 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 TSPY3P0CV98 308 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 TSPY8P0CW00 308 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 RASIP1Q5U651 963 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 REXO1Q8N1G1 1221 aaKnown RBP23.26■■□□□ 1.31
PCSK6-220ENST00000622483 C1orf54Q8WWF1 131 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 VCXQ9H320 206 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 DBNDD1Q9H9R9 158 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 MESDQ14696 234 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 FBXO33Q7Z6M2 555 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 GPBP1Q86WP2 473 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 NLGN1Q8N2Q7 840 aa23.26■■□□□ 1.31
PCSK6-220ENST00000622483 SCG3Q8WXD2 468 aaKnown RBP23.26■■□□□ 1.31
PCSK6-220ENST00000622483 TNRC6CQ9HCJ0 1690 aaKnown RBP23.25■■□□□ 1.31
PCSK6-220ENST00000622483 GTF2IP78347 998 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 UBE2SQ16763 222 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 COBLL1Q53SF7 1204 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 SNX30Q5VWJ9 437 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 FAM81AQ8TBF8 368 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 NRG4Q8WWG1 115 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 RBM17Q96I25 401 aaKnown RBP23.25■■□□□ 1.31
PCSK6-220ENST00000622483 TMEM165Q9HC07 324 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 NKIRAS1Q9NYS0 192 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 STK17AQ9UEE5 414 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 ALG6Q9Y672 507 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 TAF1LQ8IZX4 1826 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 POTEB3A0JP26 581 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 BTNL10A8MVZ5 291 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 POTECB2RU33 542 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 O00370 1275 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 XRCC5P13010 732 aaKnown RBP23.25■■□□□ 1.31
PCSK6-220ENST00000622483 KCNA1Q09470 495 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 RRP1BQ14684 758 aaKnown RBP23.25■■□□□ 1.31
PCSK6-220ENST00000622483 POTEBQ6S5H4 581 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 C6orf50Q9HD87 102 aa23.25■■□□□ 1.31
PCSK6-220ENST00000622483 SAP30BPQ9UHR5 308 aaKnown RBP23.25■■□□□ 1.31
PCSK6-220ENST00000622483 CCDC88AQ3V6T2 1871 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 MEIS1O00470 390 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 TAC1P20366 129 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 C10orf76Q5T2E6 689 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 MAIP1Q8WWC4 291 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 SLC7A6OSQ96CW6 309 aaPredicted RBP23.24■■□□□ 1.31
PCSK6-220ENST00000622483 NAP1L3Q99457 506 aaPredicted RBP23.24■■□□□ 1.31
PCSK6-220ENST00000622483 ANKRD2Q9GZV1 360 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 CTTNBP2NLQ9P2B4 639 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 GGA1Q9UJY5 639 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms