RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 LRRIQ3A6PVS8 624 aaPredicted RBP23.06■■□□□ 1.28
LIME1-210ENST00000621325 P4HA2O15460 535 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 FARP2O94887 1054 aaPredicted RBP23.06■■□□□ 1.28
LIME1-210ENST00000621325 TNNT3P45378 269 aaPredicted RBP23.06■■□□□ 1.28
LIME1-210ENST00000621325 CETN1Q12798 172 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 EFCC1Q9HA90 598 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 ARHGAP28Q9P2N2 729 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 GALCP54803 685 aa23.05■■□□□ 1.28
LIME1-210ENST00000621325 RTP1P59025 263 aa23.05■■□□□ 1.28
LIME1-210ENST00000621325 Q3C1V9 767 aa23.05■■□□□ 1.28
LIME1-210ENST00000621325 CCDC181Q5TID7 509 aa23.05■■□□□ 1.28
LIME1-210ENST00000621325 SLC20A1Q8WUM9 679 aa23.05■■□□□ 1.28
LIME1-210ENST00000621325 TAS2R14Q9NYV8 317 aa23.05■■□□□ 1.28
LIME1-210ENST00000621325 LRRC57Q8N9N7 239 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 ASAP3Q8TDY4 903 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 HDAC7Q8WUI4 952 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 IFT74Q96LB3 600 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 RSPH14Q9UHP6 348 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 TSKSQ9UJT2 592 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 L1RE1Q9UN81 338 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 CXCL11O14625 94 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 ERLIN1O75477 346 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 MOGSQ13724 837 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 KIF22Q14807 665 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 BICD1Q96G01 975 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 FBXL18Q96ME1 805 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 RBPJLQ9UBG7 517 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 AGTPBP1Q9UPW5 1226 aa23.04■■□□□ 1.28
LIME1-210ENST00000621325 IGKV6D-21A0A0A0MT36 114 aa23.03■■□□□ 1.28
LIME1-210ENST00000621325 LY6KQ17RY6 165 aa23.03■■□□□ 1.28
LIME1-210ENST00000621325 MMGT1Q8N4V1 131 aa23.03■■□□□ 1.28
LIME1-210ENST00000621325 TPCN2Q8NHX9 752 aa23.03■■□□□ 1.28
LIME1-210ENST00000621325 OPTNQ96CV9 577 aa23.03■■□□□ 1.28
LIME1-210ENST00000621325 CEP89Q96ST8 783 aa23.03■■□□□ 1.28
LIME1-210ENST00000621325 SEPT11Q9NVA2 429 aaKnown RBP23.03■■□□□ 1.28
LIME1-210ENST00000621325 KCNH4Q9UQ05 1017 aa23.03■■□□□ 1.28
LIME1-210ENST00000621325 MAP2K7O14733 419 aa23.03■■□□□ 1.28
LIME1-210ENST00000621325 RFX1P22670 979 aa23.03■■□□□ 1.28
LIME1-210ENST00000621325 MCCD1P59942 119 aaPredicted RBP23.03■■□□□ 1.28
LIME1-210ENST00000621325 FAM213AQ9BRX8 229 aa23.03■■□□□ 1.28
LIME1-210ENST00000621325 LRRC1Q9BTT6 524 aa23.03■■□□□ 1.28
LIME1-210ENST00000621325 DHX33Q9H6R0 707 aaKnown RBP23.03■■□□□ 1.28
LIME1-210ENST00000621325 GLRA2P23416 452 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 EPHX2P34913 555 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 NF2P35240 595 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 CYP24A1Q07973 514 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 BRDTQ58F21 947 aaPredicted RBP23.02■■□□□ 1.28
LIME1-210ENST00000621325 FGD4Q96M96 766 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 MFSD14AQ96MC6 490 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 KREMEN1Q96MU8 473 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 RBM12Q9NTZ6 932 aaKnown RBP23.02■■□□□ 1.28
LIME1-210ENST00000621325 TARSL2A2RTX5 802 aaKnown RBP23.02■■□□□ 1.28
LIME1-210ENST00000621325 ARIH2O95376 493 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 DLATP10515 647 aaKnown RBP23.02■■□□□ 1.28
LIME1-210ENST00000621325 ABCB4P21439 1286 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 TNFAIP3P21580 790 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 USP8P40818 1118 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 PAFAH1B1P43034 410 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 RNASE9P60153 205 aaKnown RBP23.02■■□□□ 1.28
LIME1-210ENST00000621325 ITIH3Q06033 890 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 TAS1R2Q8TE23 839 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 OSGEPQ9NPF4 335 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 ACP6Q9NPH0 428 aa23.02■■□□□ 1.28
LIME1-210ENST00000621325 SOCS7O14512 581 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 GGPS1O95749 300 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 TUBBP07437 444 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 KRT39Q6A163 491 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 GSPT2Q8IYD1 628 aaKnown RBP23.01■■□□□ 1.27
LIME1-210ENST00000621325 CNPY4Q8N129 248 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 PPM1KQ8N3J5 372 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 AGPAT1Q99943 283 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 PORCNQ9H237 461 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 INTUQ9ULD6 942 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 DAAM1Q9Y4D1 1078 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 CLGNO14967 610 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 PMM2O15305 246 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 CCDC172P0C7W6 258 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 MYBL2P10244 700 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 PPIL2Q13356 520 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 CFAP221Q4G0U5 840 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 GPD1LQ8N335 351 aa23.01■■□□□ 1.27
LIME1-210ENST00000621325 DMGDHQ9UI17 866 aaKnown RBP23.01■■□□□ 1.27
LIME1-210ENST00000621325 DPY19L2Q6NUT2 758 aa23■■□□□ 1.27
LIME1-210ENST00000621325 USP50Q70EL3 339 aaPredicted RBP23■■□□□ 1.27
LIME1-210ENST00000621325 NIFKQ9BYG3 293 aaKnown RBP23■■□□□ 1.27
LIME1-210ENST00000621325 UBXN6Q9BZV1 441 aa23■■□□□ 1.27
LIME1-210ENST00000621325 TMEM8AQ9HCN3 771 aa23■■□□□ 1.27
LIME1-210ENST00000621325 LRRIQ4A6NIV6 560 aa23■■□□□ 1.27
LIME1-210ENST00000621325 TCF7P36402 384 aaPredicted RBP23■■□□□ 1.27
LIME1-210ENST00000621325 SLC7A5Q01650 507 aa23■■□□□ 1.27
LIME1-210ENST00000621325 RPS6KA1Q15418 735 aa23■■□□□ 1.27
LIME1-210ENST00000621325 TMC2Q8TDI7 906 aa23■■□□□ 1.27
LIME1-210ENST00000621325 ARHGEF26Q96DR7 871 aa23■■□□□ 1.27
LIME1-210ENST00000621325 ATP8B3O60423 1300 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 A0A0A6YYK5 440 aaPredicted RBP22.99■■□□□ 1.27
LIME1-210ENST00000621325 KIF4AO95239 1232 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 SGPL1O95470 568 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 GARTP22102 1010 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 GJA5P36382 358 aa22.99■■□□□ 1.27
LIME1-210ENST00000621325 ARL2P36404 184 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms