RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 NCAPHQ15003 741 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 TRIP10Q15642 601 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 GRAMD1AQ96CP6 724 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 THTPAQ9BU02 230 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 OSBPL3Q9H4L5 887 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 ANTXR1Q9H6X2 564 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 RUBCNLQ9H714 662 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 NLRP10Q86W26 655 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 NUP93Q8N1F7 819 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 BBS5Q8N3I7 341 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 LINC00301Q8NCQ3 95 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 DHX38Q92620 1227 aaKnown RBP10.49□□□□□ -0.73
COL4A6-210ENST00000621266 MAGEF1Q9HAY2 307 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 GOLGA8RI6L899 631 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 PLOD1Q02809 727 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 LBRQ14739 615 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 PLA2G4DQ86XP0 818 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 MAP4K1Q92918 833 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 LSG1Q9H089 658 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 NOD2Q9HC29 1040 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 TLR3O15455 904 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 TCN1P20061 433 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 ZNF157P51786 506 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 CRYMQ14894 314 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 CCDC149Q6ZUS6 474 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 DDIASQ8IXT1 998 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 ZBED8Q8IZ13 594 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 CCDC17Q96LX7 622 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 MCM8Q9UJA3 840 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 DIS3Q9Y2L1 958 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 ABCC12Q96J65 1359 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 TET3O43151 1660 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 IGF2BP3O00425 579 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 ZNF189O75820 626 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 ATP1A1P05023 1023 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 ZNF18P17022 549 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 XPAP23025 273 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 FBXO11Q86XK2 927 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 SIX6OS1Q8N1H7 587 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 AGGF1Q8N302 714 aaeCLIP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 ANKRD36BP1Q96IX9 119 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 TMEM245Q9H330 911 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 EXOSC4Q9NPD3 245 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 FAM95CA0A1B0GW59 222 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 LRRIQ3A6PVS8 624 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 RSPH10B2B2RC85 870 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 EFCAB14O75071 495 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 RSPH10BP0C881 870 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 FKBP3Q00688 224 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 RBBP7Q16576 425 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 RNF135Q8IUD6 432 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 PI4K2BQ8TCG2 481 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 BTN2A2Q8WVV5 523 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 RIN2Q8WYP3 895 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 PLA2R1Q13018 1463 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 C16orf96A6NNT2 1141 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 SFI1A8K8P3 1242 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 GRIN3BO60391 1043 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 CLK1P49759 484 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 PDIA2Q13087 525 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 SLFN13Q68D06 897 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 SCARA5Q6ZMJ2 495 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 SFR1Q86XK3 245 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 STAG2Q8N3U4 1231 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 TTC25Q96NG3 672 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 ZCWPW1Q9H0M4 648 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 ATP6V0A4Q9HBG4 840 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 TLR7Q9NYK1 1049 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 SYNGAP1Q96PV0 1343 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 NEMP1O14524 444 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 KRT7P08729 469 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 ENO3P13929 434 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 PSMA2P25787 234 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 MARK3P27448 753 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 EIF2B2P49770 351 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 CORO7P57737 925 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 INPP5AQ14642 412 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 SLC27A3Q5K4L6 730 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 CCDC81Q6ZN84 652 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 C7orf31Q8N865 590 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 NSUN7Q8NE18 718 aaKnown RBP10.48□□□□□ -0.73
COL4A6-210ENST00000621266 OPTNQ96CV9 577 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 MTERF3Q96E29 417 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 EPAS1Q99814 870 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 CCDC134Q9H6E4 229 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 CAAP1Q9H8G2 361 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 CAMSAP1Q5T5Y3 1602 aa10.48□□□□□ -0.73
COL4A6-210ENST00000621266 ZCCHC18P0CG32 403 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 GRAPQ13588 217 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 GRAPLQ8TC17 118 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-210ENST00000621266 ADPGKQ9BRR6 497 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 FOXP1Q9H334 677 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-210ENST00000621266 NXF1Q9UBU9 619 aaKnown RBP10.47□□□□□ -0.73
COL4A6-210ENST00000621266 USP15Q9Y4E8 981 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-210ENST00000621266 ZNF521Q96K83 1311 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 TMEM191CA6NGB0 347 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 USP17L8P0C7I0 530 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 SLC16A2P36021 539 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 HLFQ16534 295 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms