RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TEX2Q8IWB9 1127 aa21.05■□□□□ 0.96
PDLIM3-212ENST00000620787 TPH2Q8IWU9 490 aa21.05■□□□□ 0.96
PDLIM3-212ENST00000620787 HOOK2Q96ED9 719 aa21.05■□□□□ 0.96
PDLIM3-212ENST00000620787 RBM17Q96I25 401 aaKnown RBP21.05■□□□□ 0.96
PDLIM3-212ENST00000620787 WNT8AQ9H1J5 351 aa21.05■□□□□ 0.96
PDLIM3-212ENST00000620787 SEL1LQ9UBV2 794 aa21.05■□□□□ 0.96
PDLIM3-212ENST00000620787 SUGT1Q9Y2Z0 365 aa21.05■□□□□ 0.96
PDLIM3-212ENST00000620787 SPATA31A6Q5VVP1 1343 aa21.05■□□□□ 0.96
PDLIM3-212ENST00000620787 CYP3A4P08684 503 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 HOXA13P31271 388 aaPredicted RBP21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 GBP2P32456 591 aaPredicted RBP21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 NFIAQ12857 509 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 LRRC14Q15048 493 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 ZNF746Q6NUN9 644 aaPredicted RBP21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 CPNE8Q86YQ8 564 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 ZFPM1Q8IX07 1006 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 FAM178BQ8IXR5 827 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 RPUSD2Q8IZ73 545 aaKnown RBP21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 DDX23Q9BUQ8 820 aaKnown RBP21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 TAOK3Q9H2K8 898 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 UBE2TQ9NPD8 197 aaPredicted RBP21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 HOMER3Q9NSC5 361 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 GGT7Q9UJ14 662 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 ZNFX1Q9P2E3 1918 aaKnown RBP21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 PASKQ96RG2 1323 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 MTA2O94776 668 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 BCRP11274 1271 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 KCNJ1P48048 391 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 SCNN1DP51172 638 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 LONRF1Q17RB8 773 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 TRAPPC3LQ5T215 181 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 CCDC25Q86WR0 208 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 L3MBTL3Q96JM7 780 aaPredicted RBP21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 ECT2Q9H8V3 914 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 FGFR1OP2Q9NVK5 253 aa21.04■□□□□ 0.96
PDLIM3-212ENST00000620787 FAM196BA6NMK8 535 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 CHRM1P11229 460 aaPredicted RBP21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 ZNF76P36508 570 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 VSTM1Q6UX27 236 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 TRMT10CQ7L0Y3 403 aaKnown RBP21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 OTOP1Q7RTM1 612 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 SIAH1Q8IUQ4 282 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 C12orf50Q8NA57 414 aaPredicted RBP21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 BANK1Q8NDB2 785 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 CCHCR1Q8TD31 782 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 AGAP11Q8TF27 550 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 PCDHB18PQ96TA0 734 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 CDC42EP4Q9H3Q1 356 aaKnown RBP21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 AAASQ9NRG9 546 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 BCS1LQ9Y276 419 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 L3MBTL1Q9Y468 752 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 A0A1B0GUA9 196 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 TCP11X1B4DZS4 312 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 TP73O15350 636 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 ATMINO43313 823 aaPredicted RBP21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 EXOC3O60645 756 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 RTN2O75298 545 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 CREB1P16220 341 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 ALDH5A1P51649 535 aaPredicted RBP21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 MYO1EQ12965 1108 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 OTUD6AQ7L8S5 288 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 SLC9A9Q8IVB4 645 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 RDH13Q8NBN7 331 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 MGARPQ8TDB4 240 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 MORC4Q8TE76 937 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 WDR18Q9BV38 432 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 MTUS1Q9ULD2 1270 aa21.03■□□□□ 0.96
PDLIM3-212ENST00000620787 TMEM120BA0PK00 339 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 BBOX1O75936 387 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 DLG4P78352 724 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 STXBP4Q6ZWJ1 553 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 NSMCE1Q8WV22 266 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 DYDC1Q8WWB3 177 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 POP1Q99575 1024 aaKnown RBP21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 C15orf41Q9Y2V0 281 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 LY75O60449 1722 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 EMSYQ7Z589 1322 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 RIMBP2O15034 1052 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 CHMP2AO43633 222 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 BNIP1Q12981 228 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 MIGA2Q7L4E1 593 aa21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 ARHGEF2Q92974 986 aaKnown RBP21.02■□□□□ 0.96
PDLIM3-212ENST00000620787 IGF2BP3O00425 579 aaKnown RBP eCLIP21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 PSMD10O75832 226 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 SUN1O94901 812 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 ANP32DO95626 131 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 CHRNB2P17787 502 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 RRP1BQ14684 758 aaKnown RBP21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 ODR4Q5SWX8 454 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 MAB21L3Q8N8X9 362 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 RSRC1Q96IZ7 334 aaKnown RBP21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 SERPINB12Q96P63 405 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 STRA6Q9BX79 667 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 LOXHD1Q8IVV2 1947 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 ACSL3O95573 720 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 ECEL1O95672 775 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 SLC8A3P57103 927 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 SYDE2Q5VT97 1194 aa21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 APOBEC3HQ6NTF7 200 aaKnown RBP21.01■□□□□ 0.95
PDLIM3-212ENST00000620787 RNF207Q6ZRF8 634 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms