RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 NUGGCQ68CJ6 796 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 ZNF746Q6NUN9 644 aaPredicted RBP21.48■■□□□ 1.03
FGFR1-241ENST00000619564 ZNF280CQ8ND82 737 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 SUDS3Q9H7L9 328 aaPredicted RBP21.48■■□□□ 1.03
FGFR1-241ENST00000619564 ABCB6Q9NP58 842 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 MTMR4Q9NYA4 1195 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 GRIN3BO60391 1043 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 DCAF4L1Q3SXM0 396 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 XKR3Q5GH77 459 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 SH3TC2Q8TF17 1288 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 PPP2R3CQ969Q6 453 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 NCLNQ969V3 563 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 TRPV6Q9H1D0 765 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 GTSE1Q9NYZ3 720 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 BFARQ9NZS9 450 aa21.48■■□□□ 1.03
FGFR1-241ENST00000619564 RASA4BC9J798 803 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 RASA4O43374 803 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 PRAMEP78395 509 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 ACAD11Q709F0 780 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 TRIM55Q9BYV6 548 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 ZNF189O75820 626 aaPredicted RBP21.47■■□□□ 1.03
FGFR1-241ENST00000619564 TRIM49P0CI25 452 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 TRIM49CP0CI26 452 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 ARHGDIAP52565 204 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 FLT1P17948 1338 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 CTIFO43310 598 aaKnown RBP21.47■■□□□ 1.03
FGFR1-241ENST00000619564 GGPS1O95749 300 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 PDIA5Q14554 519 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 PRR5LQ6MZQ0 368 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 TADA2BQ86TJ2 420 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 SPATA2LQ8IUW3 424 aaPredicted RBP21.47■■□□□ 1.03
FGFR1-241ENST00000619564 PGBD4Q96DM1 585 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 PARVAQ9NVD7 372 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 TTC7AQ9ULT0 858 aaPredicted RBP21.47■■□□□ 1.03
FGFR1-241ENST00000619564 ALKQ9UM73 1620 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 ZNF235Q14590 738 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 KRT80Q6KB66 452 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 FRMD5Q7Z6J6 570 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 PITPNM3Q9BZ71 974 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 WNT8AQ9H1J5 351 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 SMARCAD1Q9H4L7 1026 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 TJP2Q9UDY2 1190 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 ANGPTL2Q9UKU9 493 aa21.47■■□□□ 1.03
FGFR1-241ENST00000619564 KDM6AO15550 1401 aaPredicted RBP21.47■■□□□ 1.03
FGFR1-241ENST00000619564 DGAT1O75907 488 aa21.46■■□□□ 1.03
FGFR1-241ENST00000619564 ZNF157P51786 506 aaPredicted RBP21.46■■□□□ 1.03
FGFR1-241ENST00000619564 SCARF1Q14162 830 aa21.46■■□□□ 1.03
FGFR1-241ENST00000619564 FSCBQ5H9T9 825 aa21.46■■□□□ 1.03
FGFR1-241ENST00000619564 APOBEC2Q9Y235 224 aaKnown RBP21.46■■□□□ 1.03
FGFR1-241ENST00000619564 ANP32DO95626 131 aa21.46■■□□□ 1.03
FGFR1-241ENST00000619564 HADHAP40939 763 aa21.46■■□□□ 1.03
FGFR1-241ENST00000619564 ZNF543Q08ER8 600 aa21.46■■□□□ 1.03
FGFR1-241ENST00000619564 SF3B3Q15393 1217 aaKnown RBP21.46■■□□□ 1.03
FGFR1-241ENST00000619564 GTF3C2Q8WUA4 911 aaPredicted RBP21.46■■□□□ 1.03
FGFR1-241ENST00000619564 ZFYVE28Q9HCC9 887 aa21.46■■□□□ 1.03
FGFR1-241ENST00000619564 LCP1P13796 627 aa21.46■■□□□ 1.03
FGFR1-241ENST00000619564 BAATQ14032 418 aaPredicted RBP21.46■■□□□ 1.03
FGFR1-241ENST00000619564 ZBTB41Q5SVQ8 909 aa21.46■■□□□ 1.03
FGFR1-241ENST00000619564 ASAP2O43150 1006 aa21.45■■□□□ 1.03
FGFR1-241ENST00000619564 DCTN3O75935 186 aa21.45■■□□□ 1.03
FGFR1-241ENST00000619564 EEF1B2P24534 225 aaKnown RBP21.45■■□□□ 1.03
FGFR1-241ENST00000619564 GRIK1P39086 918 aa21.45■■□□□ 1.03
FGFR1-241ENST00000619564 PTK2BQ14289 1009 aa21.45■■□□□ 1.03
FGFR1-241ENST00000619564 SYT2Q8N9I0 419 aaPredicted RBP21.45■■□□□ 1.03
FGFR1-241ENST00000619564 EGFL8Q99944 293 aa21.45■■□□□ 1.03
FGFR1-241ENST00000619564 PFASO15067 1338 aa21.45■■□□□ 1.03
FGFR1-241ENST00000619564 GH1P01241 217 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 SRBD1Q8N5C6 995 aaKnown RBP21.45■■□□□ 1.02
FGFR1-241ENST00000619564 CXorf38Q8TB03 319 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 ALDH8A1Q9H2A2 487 aaPredicted RBP21.45■■□□□ 1.02
FGFR1-241ENST00000619564 ZNF70Q9UC06 446 aaPredicted RBP21.45■■□□□ 1.02
FGFR1-241ENST00000619564 SPATA31A6Q5VVP1 1343 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 A0A0G2JND7 137 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 PDXKO00764 312 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 CYBBP04839 570 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 DYNC1LI2O43237 492 aaPredicted RBP21.45■■□□□ 1.02
FGFR1-241ENST00000619564 TRMT10CQ7L0Y3 403 aaKnown RBP21.45■■□□□ 1.02
FGFR1-241ENST00000619564 RASSF3Q86WH2 238 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 SH3KBP1Q96B97 665 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 NYAP2Q9P242 653 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 USP31Q70CQ4 1352 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 CHRNA3P32297 505 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 POU5F1BQ06416 359 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 TAS2R42Q7RTR8 314 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 ATG9AQ7Z3C6 839 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 TRIM54Q9BYV2 358 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 L3MBTL1Q9Y468 752 aa21.45■■□□□ 1.02
FGFR1-241ENST00000619564 GLI2P10070 1586 aa21.44■■□□□ 1.02
FGFR1-241ENST00000619564 CHD1O14646 1710 aa21.44■■□□□ 1.02
FGFR1-241ENST00000619564 TRPA1O75762 1119 aa21.44■■□□□ 1.02
FGFR1-241ENST00000619564 ZNF211Q13398 564 aaPredicted RBP21.44■■□□□ 1.02
FGFR1-241ENST00000619564 PPARGC1AQ9UBK2 798 aaKnown RBP21.44■■□□□ 1.02
FGFR1-241ENST00000619564 C6orf222P0C671 652 aaPredicted RBP21.44■■□□□ 1.02
FGFR1-241ENST00000619564 PPM1NQ8N819 430 aa21.44■■□□□ 1.02
FGFR1-241ENST00000619564 LAMC1P11047 1609 aa21.44■■□□□ 1.02
FGFR1-241ENST00000619564 F5H423 210 aaPredicted RBP21.44■■□□□ 1.02
FGFR1-241ENST00000619564 STXBP3O00186 592 aa21.44■■□□□ 1.02
FGFR1-241ENST00000619564 NDUFB10O96000 172 aa21.44■■□□□ 1.02
FGFR1-241ENST00000619564 HSD17B4P51659 736 aa21.44■■□□□ 1.02
FGFR1-241ENST00000619564 MRPS25P82663 173 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms