RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 OR2W6PQ8NHA6 318 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 NT5C3AQ9H0P0 336 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 TMBIM4Q9HC24 238 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 TCEAL9Q9UHQ7 104 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 FBXL5Q9UKA1 691 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 AMFRQ9UKV5 643 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 PNMA2Q9UL42 364 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 ATP8A1Q9Y2Q0 1164 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 MYMKA6NI61 221 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 FAM86B1E9PN63 330 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 DDX39AO00148 427 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 EPHB6O15197 1021 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 FAM86B2P0C5J1 330 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 HSD17B3P37058 310 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 HSPA9P38646 679 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 STAT3P40763 770 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 EIF3BP55884 814 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 HIBCHQ6NVY1 386 aaPredicted RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 CROCCP2Q86T23 111 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 CCDC63Q8NA47 563 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 KIAA0895Q8NCT3 520 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 ERMNQ8TAM6 284 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 SYN2Q92777 582 aaPredicted RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 WNK4Q96J92 1243 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 CEP63Q96MT8 703 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 DDX47Q9H0S4 455 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 RNF19AQ9NV58 838 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 ARMCX3Q9UH62 379 aaPredicted RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 SUFUQ9UMX1 484 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 CLGNO14967 610 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 RGS16O15492 202 aaPredicted RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 SART1O43290 800 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 RPS6P62753 249 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 BAATQ14032 418 aaPredicted RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 PDIA5Q14554 519 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 PPP2R5EQ16537 467 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 NOL9Q5SY16 702 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 ARHGEF16Q5VV41 709 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 ALKBH5Q6P6C2 394 aaKnown RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 DNAJC14Q6Y2X3 702 aaPredicted RBP7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 CATSPERGQ6ZRH7 1159 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 FMNL3Q8IVF7 1028 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 RAD54LQ92698 747 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 HAS1Q92839 578 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 HVCN1Q96D96 273 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 TBC1D31Q96DN5 1066 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 SEC16BQ96JE7 1060 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 FMO2Q99518 471 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 SEPT3Q9UH03 358 aa7.54□□□□□ -1.2
SRGAP3-213ENST00000618999 ZNF536O15090 1300 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 KDM3AQ9Y4C1 1321 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 CCDC169A6NNP5 214 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 EDIL3O43854 480 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 CLTAP09496 248 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 RPL13P26373 211 aaKnown RBP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 TMOD1P28289 359 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 FXR2P51116 673 aaKnown RBP eCLIP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 CYP4A11Q02928 519 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 NCOA4Q13772 614 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 CYB5D1Q6P9G0 228 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 SLC30A10Q6XR72 485 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 TRMT1LQ7Z2T5 733 aaKnown RBP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 U2AF1L4Q8WU68 220 aaKnown RBP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 CTNNBL1Q8WYA6 563 aaPredicted RBP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 SGSM3Q96HU1 749 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 RMDN3Q96TC7 470 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 TEX13BQ9BXU2 312 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 HAUS2Q9NVX0 235 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 GGA2Q9UJY4 613 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 KIAA1024Q9UPX6 916 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 NOC2LQ9Y3T9 749 aaKnown RBP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 RIPK3Q9Y572 518 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 SRRM3A6NNA2 597 aaPredicted RBP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 BACH1O14867 736 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 GAS7O60861 476 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 TBCAO75347 108 aaKnown RBP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 RPSAP08865 295 aaKnown RBP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 XRCC5P13010 732 aaKnown RBP7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 EXOC3L4Q17RC7 722 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 CEP55Q53EZ4 464 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 AGBL2Q5U5Z8 902 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 LRCH2Q5VUJ6 765 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 KCNV1Q6PIU1 500 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 GPBP1Q86WP2 473 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 ANKRD35Q8N283 1001 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 TCP11Q8WWU5 503 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 OPTNQ96CV9 577 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 CHMP6Q96FZ7 201 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 FAM20AQ96MK3 541 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 TAAR1Q96RJ0 339 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 NUDT12Q9BQG2 462 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 ZNF577Q9BSK1 485 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 MSH4O15457 936 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 DAPK3O43293 454 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 NEBLO76041 1014 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 NR2F2P24468 414 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 PPATQ06203 517 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 COASYQ13057 564 aa7.53□□□□□ -1.2
SRGAP3-213ENST00000618999 ITGB3BPQ13352 177 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms