RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 MBOAT7Q96N66 472 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 RPS6KC1Q96S38 1066 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 DHX33Q9H6R0 707 aaKnown RBP5.07□□□□□ -1.6
SYCP1-210ENST00000618516 PANK4Q9NVE7 773 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 PCDHB2Q9Y5E7 798 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.07□□□□□ -1.6
SYCP1-210ENST00000618516 SMIM35A0A1B0GVV1 85 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.07□□□□□ -1.6
SYCP1-210ENST00000618516 MBLAC1A4D2B0 266 aaPredicted RBP5.07□□□□□ -1.6
SYCP1-210ENST00000618516 GPR182O15218 404 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 TRAK2O60296 914 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 KINO60870 393 aaKnown RBP5.07□□□□□ -1.6
SYCP1-210ENST00000618516 EYA4O95677 639 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 CXCL8P10145 99 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 FOSL2P15408 326 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 LONP1P36776 959 aaKnown RBP5.07□□□□□ -1.6
SYCP1-210ENST00000618516 SMTNP53814 917 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 TRIM71Q2Q1W2 868 aaKnown RBP5.07□□□□□ -1.6
SYCP1-210ENST00000618516 PLPP4Q5VZY2 271 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 TMC7Q7Z402 723 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 HAUS6Q7Z4H7 955 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 ZNF280BQ86YH2 543 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 MRPS27Q92552 414 aaKnown RBP5.07□□□□□ -1.6
SYCP1-210ENST00000618516 FAM213AQ9BRX8 229 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 NT5C3AQ9H0P0 336 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 PARVGQ9HBI0 331 aa5.07□□□□□ -1.6
SYCP1-210ENST00000618516 LARSQ9P2J5 1176 aaKnown RBP5.07□□□□□ -1.6
SYCP1-210ENST00000618516 ZNF202O95125 648 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 GJB5O95377 273 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 CASP4P49662 377 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 CRYBB1P53674 252 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 ADAM17P78536 824 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 TFDP1Q14186 410 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 TARBP2Q15633 366 aaKnown RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 AXDND1Q5T1B0 1012 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 TCERG1LQ5VWI1 586 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 SLC43A3Q8NBI5 491 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 MCPH1Q8NEM0 835 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 POP1Q99575 1024 aaKnown RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 ADPGKQ9BRR6 497 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 SCAND2PQ9GZW5 306 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 TTYH1Q9H313 450 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 TUFT1Q9NNX1 390 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 FAM105AQ9NUU6 356 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 PCDHB13Q9Y5F0 798 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 CLDN3O15551 220 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 RECQL4O94761 1208 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 SLC12A3P55017 1021 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 TFAMQ00059 246 aaKnown RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 PDIA5Q14554 519 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 PLEKHG4Q58EX7 1191 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 ATF7IP2Q5U623 682 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 ARL6IP4Q66PJ3 421 aaKnown RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 KIAA1841Q6NSI8 718 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 CNKSR3Q6P9H4 555 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 TRAF7Q6Q0C0 670 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 GLB1LQ6UWU2 654 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 B3GNT9Q6UX72 402 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 C18orf25Q96B23 403 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 CBWD1Q9BRT8 395 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 ADAMTS10Q9H324 1103 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 EXOC1Q9NV70 894 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 KDM3AQ9Y4C1 1321 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 ANKRD63C9JTQ0 380 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 B4GALT3O60512 393 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 TSPAN1O60635 241 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 CUTAO60888 179 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 B3GAT3O94766 335 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 YEATS4O95619 227 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 BMP15O95972 392 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 HOXD8P13378 290 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 ITGA4P13612 1032 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 IRS1P35568 1242 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 NASPP49321 788 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 ALDH7A1P49419 539 aaKnown RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 IFRD2Q12894 506 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 STK4Q13043 487 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 GIT2Q14161 759 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 MXD4Q14582 209 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 SCARA3Q6AZY7 606 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 CAVIN1Q6NZI2 390 aaKnown RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 C1orf186Q6ZWK4 172 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 SLC24A5Q71RS6 500 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 PALB2Q86YC2 1186 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 FIBCD1Q8N539 461 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 STKLD1Q8NE28 680 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 FEZF2Q8TBJ5 459 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 TCP11Q8WWU5 503 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 DRC1Q96MC2 740 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 POLR3CQ9BUI4 534 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 MSTO1Q9BUK6 570 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 NIFKQ9BYG3 293 aaKnown RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 ENTPD7Q9NQZ7 604 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 IPPQ9Y573 584 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 NUB1Q9Y5A7 615 aa5.06□□□□□ -1.6
SYCP1-210ENST00000618516 MRPL42Q9Y6G3 142 aaKnown RBP5.06□□□□□ -1.6
SYCP1-210ENST00000618516 CELSR3Q9NYQ7 3312 aa5.05□□□□□ -1.6
SYCP1-210ENST00000618516 TRIM49BA6NDI0 452 aa5.05□□□□□ -1.6
SYCP1-210ENST00000618516 LAD1O00515 517 aa5.05□□□□□ -1.6
SYCP1-210ENST00000618516 ITGB1P05556 798 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 373.6 ms