RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 PNMA2Q9UL42 364 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 EXOC7Q9UPT5 735 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 FAN1Q9Y2M0 1017 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 SPATA31C2B4DYI2 1134 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 MAFGO15525 162 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 BUB1BO60566 1050 aaPredicted RBP13.42□□□□□ -0.26
CIITA-212ENST00000618207 EIF3JO75822 258 aaKnown RBP13.42□□□□□ -0.26
CIITA-212ENST00000618207 LY6KQ17RY6 165 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 MAP9Q49MG5 647 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 PHLDB2Q86SQ0 1253 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 SLC47A2Q86VL8 602 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 MAP4K3Q8IVH8 894 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 SAMD3Q8N6K7 520 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 OLIG1Q8TAK6 271 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 PARD3BQ8TEW8 1205 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 TATDN2Q93075 761 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 ATP6V0A4Q9HBG4 840 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 EPB41L5Q9HCM4 733 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 ZNF302Q9NR11 478 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 DGAT1O75907 488 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 HEXIM1O94992 359 aaKnown RBP13.41□□□□□ -0.26
CIITA-212ENST00000618207 SUPT20HL2P0C7V6 817 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 MAPTP10636 758 aaKnown RBP13.41□□□□□ -0.26
CIITA-212ENST00000618207 SSTR3P32745 418 aaPredicted RBP13.41□□□□□ -0.26
CIITA-212ENST00000618207 LIG4P49917 911 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 GPS2Q13227 327 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 HSP90B2PQ58FF3 399 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 C10orf76Q5T2E6 689 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 TRIM50Q86XT4 487 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 SLC30A5Q8TAD4 765 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 KIFAP3Q92845 792 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 KREMEN1Q96MU8 473 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 IWS1Q96ST2 819 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 STIM2Q9P246 746 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 TSKSQ9UJT2 592 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 FTLP02792 175 aaPredicted RBP13.41□□□□□ -0.26
CIITA-212ENST00000618207 ALDH5A1P51649 535 aaPredicted RBP13.41□□□□□ -0.26
CIITA-212ENST00000618207 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
CIITA-212ENST00000618207 EMC2Q15006 297 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 XRRA1Q6P2D8 792 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 LBX2Q6XYB7 198 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 TAS1R3Q7RTX0 852 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 LRRC57Q8N9N7 239 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 AGPAT1Q99943 283 aa13.41□□□□□ -0.26
CIITA-212ENST00000618207 TARSL2A2RTX5 802 aaKnown RBP13.4□□□□□ -0.26
CIITA-212ENST00000618207 KRT5P13647 590 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 UBA1P22314 1058 aaKnown RBP13.4□□□□□ -0.26
CIITA-212ENST00000618207 COPB2P35606 906 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 CARSP49589 748 aaKnown RBP13.4□□□□□ -0.26
CIITA-212ENST00000618207 GUCY2FP51841 1108 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 WNT7BP56706 349 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 DRP2Q13474 957 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 CDHR1Q96JP9 859 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 SPATC1LQ9H0A9 340 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 DDX47Q9H0S4 455 aaKnown RBP13.4□□□□□ -0.26
CIITA-212ENST00000618207 CTTNBP2NLQ9P2B4 639 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 NFU1Q9UMS0 254 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 MMEP08473 750 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 TNNI1P19237 187 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
CIITA-212ENST00000618207 MKRN3Q13064 507 aaKnown RBP13.4□□□□□ -0.26
CIITA-212ENST00000618207 IFI16Q16666 785 aaKnown RBP13.4□□□□□ -0.26
CIITA-212ENST00000618207 C2CD6Q53TS8 623 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 EAPPQ56P03 285 aaPredicted RBP13.4□□□□□ -0.26
CIITA-212ENST00000618207 KRT39Q6A163 491 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 SV2AQ7L0J3 742 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 ASAP3Q8TDY4 903 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 ZBTB10Q96DT7 871 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 BTBD6Q96KE9 485 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 UBXN6Q9BZV1 441 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 MCM3APO60318 1980 aa13.4□□□□□ -0.26
CIITA-212ENST00000618207 SOWAHBA6NEL2 793 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 TUBBP07437 444 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 CCDC172P0C7W6 258 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 ITGA4P13612 1032 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 MCM3P25205 808 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 XKR3Q5GH77 459 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 ZBTB41Q5SVQ8 909 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 TMEM63BQ5T3F8 832 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 NOP9Q86U38 636 aaKnown RBP13.4□□□□□ -0.27
CIITA-212ENST00000618207 USP38Q8NB14 1042 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 MCPH1Q8NEM0 835 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 TARS2Q9BW92 718 aaKnown RBP13.4□□□□□ -0.27
CIITA-212ENST00000618207 ASCC2Q9H1I8 757 aaPredicted RBP13.4□□□□□ -0.27
CIITA-212ENST00000618207 ZNF408Q9H9D4 720 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 TXNRD2Q9NNW7 524 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 ADARB2Q9NS39 739 aaKnown RBP13.4□□□□□ -0.27
CIITA-212ENST00000618207 ADAM21Q9UKJ8 722 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 HPCAL4Q9UM19 191 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 COG5Q9UP83 839 aa13.4□□□□□ -0.27
CIITA-212ENST00000618207 ATP2A1O14983 1001 aa13.39□□□□□ -0.27
CIITA-212ENST00000618207 RAD51CO43502 376 aa13.39□□□□□ -0.27
CIITA-212ENST00000618207 GGPS1O95749 300 aa13.39□□□□□ -0.27
CIITA-212ENST00000618207 BIRC3Q13489 604 aa13.39□□□□□ -0.27
CIITA-212ENST00000618207 MYBPC2Q14324 1141 aa13.39□□□□□ -0.27
CIITA-212ENST00000618207 Q3C1V9 767 aa13.39□□□□□ -0.27
CIITA-212ENST00000618207 SPOPLQ6IQ16 392 aa13.39□□□□□ -0.27
CIITA-212ENST00000618207 AADACL2Q6P093 401 aa13.39□□□□□ -0.27
CIITA-212ENST00000618207 CPNE8Q86YQ8 564 aa13.39□□□□□ -0.27
CIITA-212ENST00000618207 GPD1LQ8N335 351 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms