RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 KIFC3Q9BVG8 833 aa24.46■■□□□ 1.51
CBWD3-212ENST00000616550 APOL6Q9BWW8 343 aa24.46■■□□□ 1.51
CBWD3-212ENST00000616550 NT5C1B-RDH14C9J2C7 533 aa24.45■■□□□ 1.5
CBWD3-212ENST00000616550 ACKR2O00590 384 aa24.45■■□□□ 1.5
CBWD3-212ENST00000616550 PLA2G4BP0C869 781 aa24.45■■□□□ 1.5
CBWD3-212ENST00000616550 GUCY2CP25092 1073 aa24.45■■□□□ 1.5
CBWD3-212ENST00000616550 PEX3P56589 373 aa24.45■■□□□ 1.5
CBWD3-212ENST00000616550 ADGRD2Q7Z7M1 963 aa24.45■■□□□ 1.5
CBWD3-212ENST00000616550 CCDC113Q9H0I3 377 aa24.45■■□□□ 1.5
CBWD3-212ENST00000616550 RNF39Q9H2S5 420 aa24.45■■□□□ 1.5
CBWD3-212ENST00000616550 NXF3Q9H4D5 531 aaKnown RBP24.45■■□□□ 1.5
CBWD3-212ENST00000616550 TLE6Q9H808 572 aa24.45■■□□□ 1.5
CBWD3-212ENST00000616550 C17orf75Q9HAS0 396 aa24.45■■□□□ 1.5
CBWD3-212ENST00000616550 MYH11P35749 1972 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 ARL5CA6NH57 179 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 K7ERI5 159 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 POMCP01189 267 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 GALTP07902 379 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 MARCKSP29966 332 aaPredicted RBP24.44■■□□□ 1.5
CBWD3-212ENST00000616550 GTF2F1P35269 517 aaKnown RBP eCLIP24.44■■□□□ 1.5
CBWD3-212ENST00000616550 SLC12A3P55017 1021 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 CEBPZQ03701 1054 aaKnown RBP24.44■■□□□ 1.5
CBWD3-212ENST00000616550 GRIN1Q05586 938 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 BMS1Q14692 1282 aaKnown RBP24.44■■□□□ 1.5
CBWD3-212ENST00000616550 PTPAQ15257 358 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 CTC1Q2NKJ3 1217 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 RBM23Q86U06 439 aaKnown RBP24.44■■□□□ 1.5
CBWD3-212ENST00000616550 ZNF280BQ86YH2 543 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 DAW1Q8N136 415 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 GAD1Q99259 594 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 TCF25Q9BQ70 676 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 ADPGKQ9BRR6 497 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 ENTPD7Q9NQZ7 604 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 KCND2Q9NZV8 630 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 PARP2Q9UGN5 583 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 KCNG1Q9UIX4 513 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 GIT1Q9Y2X7 761 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 PCDHGC5Q9Y5F6 944 aa24.44■■□□□ 1.5
CBWD3-212ENST00000616550 FSCN2O14926 492 aa24.43■■□□□ 1.5
CBWD3-212ENST00000616550 ALDH2P05091 517 aa24.43■■□□□ 1.5
CBWD3-212ENST00000616550 PDIA4P13667 645 aaKnown RBP24.43■■□□□ 1.5
CBWD3-212ENST00000616550 NPTX2P47972 431 aa24.43■■□□□ 1.5
CBWD3-212ENST00000616550 NRIP1P48552 1158 aa24.43■■□□□ 1.5
CBWD3-212ENST00000616550 AFF1P51825 1210 aaKnown RBP24.43■■□□□ 1.5
CBWD3-212ENST00000616550 PLPP4Q5VZY2 271 aa24.43■■□□□ 1.5
CBWD3-212ENST00000616550 TMC7Q7Z402 723 aa24.43■■□□□ 1.5
CBWD3-212ENST00000616550 UHRF1Q96T88 793 aaPredicted RBP24.43■■□□□ 1.5
CBWD3-212ENST00000616550 PDZD7Q9H5P4 517 aa24.43■■□□□ 1.5
CBWD3-212ENST00000616550 NGRNQ9NPE2 291 aaKnown RBP24.43■■□□□ 1.5
CBWD3-212ENST00000616550 KMT5AQ9NQR1 393 aa24.43■■□□□ 1.5
CBWD3-212ENST00000616550 DNAJB4Q9UDY4 337 aa24.43■■□□□ 1.5
CBWD3-212ENST00000616550 RBM19Q9Y4C8 960 aaKnown RBP24.43■■□□□ 1.5
CBWD3-212ENST00000616550 TTLL13PA6NNM8 815 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 SFI1A8K8P3 1242 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 H3BQ06 376 aaPredicted RBP24.42■■□□□ 1.5
CBWD3-212ENST00000616550 DDHD2O94830 711 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 AKAP5P24588 427 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 MLH1P40692 756 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 SLC11A1P49279 550 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 RAD51AP2Q09MP3 1159 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 MAPK7Q13164 816 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 ADAM15Q13444 863 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 PUS10Q3MIT2 529 aaKnown RBP24.42■■□□□ 1.5
CBWD3-212ENST00000616550 IGSF21Q96ID5 467 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 TMEM175Q9BSA9 504 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 DAXXQ9UER7 740 aaPredicted RBP24.42■■□□□ 1.5
CBWD3-212ENST00000616550 FAN1Q9Y2M0 1017 aa24.42■■□□□ 1.5
CBWD3-212ENST00000616550 SRPRBQ9Y5M8 271 aaKnown RBP24.42■■□□□ 1.5
CBWD3-212ENST00000616550 TDRD15B5MCY1 1934 aaKnown RBP24.41■■□□□ 1.5
CBWD3-212ENST00000616550 PHLPP2Q6ZVD8 1323 aa24.41■■□□□ 1.5
CBWD3-212ENST00000616550 INPPL1O15357 1258 aa24.41■■□□□ 1.5
CBWD3-212ENST00000616550 KARSQ15046 597 aaKnown RBP24.41■■□□□ 1.5
CBWD3-212ENST00000616550 APBB1IPQ7Z5R6 666 aaPredicted RBP24.41■■□□□ 1.5
CBWD3-212ENST00000616550 EFHBQ8N7U6 833 aa24.41■■□□□ 1.5
CBWD3-212ENST00000616550 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.41■■□□□ 1.5
CBWD3-212ENST00000616550 ZFP42Q96MM3 310 aa24.41■■□□□ 1.5
CBWD3-212ENST00000616550 CDCA3Q99618 268 aaPredicted RBP24.41■■□□□ 1.5
CBWD3-212ENST00000616550 CCSER1Q9C0I3 900 aa24.41■■□□□ 1.5
CBWD3-212ENST00000616550 TMEM134Q9H6X4 195 aa24.41■■□□□ 1.5
CBWD3-212ENST00000616550 USP20Q9Y2K6 914 aa24.41■■□□□ 1.5
CBWD3-212ENST00000616550 FSD2A1L4K1 749 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 PER2O15055 1255 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 LINC01565O15544 149 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 PLS3P13797 630 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 PLCG1P19174 1290 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 LTBRP36941 435 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 NDUFV1P49821 464 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 SMTNP53814 917 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 DHX8Q14562 1220 aaKnown RBP24.4■■□□□ 1.5
CBWD3-212ENST00000616550 SMC1AQ14683 1233 aaKnown RBP24.4■■□□□ 1.5
CBWD3-212ENST00000616550 ATF7IP2Q5U623 682 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 PTCRAQ6ISU1 281 aaPredicted RBP24.4■■□□□ 1.5
CBWD3-212ENST00000616550 DDX53Q86TM3 631 aaKnown RBP24.4■■□□□ 1.5
CBWD3-212ENST00000616550 TMEM173Q86WV6 379 aaPredicted RBP24.4■■□□□ 1.5
CBWD3-212ENST00000616550 VPS52Q8N1B4 723 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 USP28Q96RU2 1077 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 MIOSQ9NXC5 875 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 ARHGAP28Q9P2N2 729 aa24.4■■□□□ 1.5
CBWD3-212ENST00000616550 FBXO2Q9UK22 296 aaPredicted RBP24.4■■□□□ 1.5
CBWD3-212ENST00000616550 SCNN1GP51170 649 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms